Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   GRT08_RS00590 Genome accession   NZ_CP047234
Coordinates   108090..109172 (+) Length   360 a.a.
NCBI ID   WP_003156401.1    Uniprot ID   A0AAI8HS26
Organism   Bacillus amyloliquefaciens strain FJ4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 103090..114172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GRT08_RS00575 (GRT08_00575) - 103093..104184 (+) 1092 WP_003156398.1 protein arginine kinase -
  GRT08_RS00580 (GRT08_00580) clpC 104181..106613 (+) 2433 WP_007410388.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  GRT08_RS00585 (GRT08_00585) radA/sms 106707..108086 (+) 1380 WP_014416742.1 DNA repair protein RadA Machinery gene
  GRT08_RS00590 (GRT08_00590) disA 108090..109172 (+) 1083 WP_003156401.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  GRT08_RS00595 (GRT08_00595) - 109286..110386 (+) 1101 WP_003156403.1 PIN/TRAM domain-containing protein -
  GRT08_RS00600 (GRT08_00600) ispD 110399..111097 (+) 699 WP_071392202.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  GRT08_RS00605 (GRT08_00605) ispF 111090..111566 (+) 477 WP_003156407.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  GRT08_RS00610 (GRT08_00610) gltX 111658..113109 (+) 1452 WP_071392201.1 glutamate--tRNA ligase -
  GRT08_RS00615 (GRT08_00615) cysE 113420..114073 (+) 654 WP_003156410.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40671.21 Da        Isoelectric Point: 5.5321

>NTDB_id=358283 GRT08_RS00590 WP_003156401.1 108090..109172(+) (disA) [Bacillus amyloliquefaciens strain FJ4]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATVEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=358283 GRT08_RS00590 WP_003156401.1 108090..109172(+) (disA) [Bacillus amyloliquefaciens strain FJ4]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATTCTGCAGTTCGTTGCACCGGGCACCCCGCT
CAGAGCCGGGATAGAGAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAATGATAAGGTAAAGCAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGTGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATCGCCATTTCTGAGCGCAGAAATG
TCATTACGTTATATCAGGACAGCATGAAGTACACACTAAAGGACATAGGTTTTATTTTAACAAAGGCAAATCAGGCGATT
CAAACGCTCGAGAAGTATAAAACCATTTTAGACAAAACGATTACGGCTTTAAACGCATTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCTGTCATGCATCGGTATGAAATGGTGCTTCGAATAAAAAATGAAATCAATATGTATATTAAAG
AACTCGGAACGGAAGGACACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGACATGGAAGAAGAGGCGGCGCTTTTC
ATCAAAGACTATGTCAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGATTCCATTCTGTTTAAACTGCTTGGATATCCGGCTTCTACGAATCTTGATGATTATGTGCTCCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCGTTCGGATTTTTGCCAAGC
ATAACGGAAGCCACTGTAGAAGAGCTTGATGATGTCGAGGGTATCGGCGAAGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTTCAGGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AAI8HS26

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.444

100

0.944