Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilH   Type   Machinery gene
Locus tag   BAXH7_RS08715 Genome accession   NC_017191
Coordinates   1778483..1778845 (-) Length   120 a.a.
NCBI ID   WP_003154238.1    Uniprot ID   A0A150FA43
Organism   Bacillus amyloliquefaciens XH7     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1773483..1783845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAXH7_RS08690 (BAXH7_01823) flhB 1775008..1776087 (-) 1080 WP_013352272.1 flagellar biosynthesis protein FlhB -
  BAXH7_RS08695 (BAXH7_01824) fliR 1776087..1776866 (-) 780 WP_013352271.1 flagellar biosynthetic protein FliR -
  BAXH7_RS08700 (BAXH7_01825) fliQ 1776873..1777142 (-) 270 WP_013352270.1 flagellar biosynthesis protein FliQ -
  BAXH7_RS08705 (BAXH7_01826) fliP 1777157..1777822 (-) 666 WP_013352269.1 flagellar type III secretion system pore protein FliP -
  BAXH7_RS08710 (BAXH7_01827) fliZ 1777815..1778468 (-) 654 WP_013352268.1 flagella biosynthesis regulatory protein FliZ -
  BAXH7_RS08715 (BAXH7_01828) pilH 1778483..1778845 (-) 363 WP_003154238.1 chemotaxis protein CheY Machinery gene
  BAXH7_RS08720 (BAXH7_01829) fliY 1778872..1780005 (-) 1134 WP_013352267.1 flagellar motor switch phosphatase FliY -
  BAXH7_RS08725 (BAXH7_01830) fliM 1779995..1780993 (-) 999 WP_013352266.1 flagellar motor switch protein FliM -
  BAXH7_RS08730 (BAXH7_01831) fliL 1781027..1781446 (-) 420 WP_013352265.1 flagellar basal body-associated protein FliL -
  BAXH7_RS08735 (BAXH7_01832) - 1781443..1781658 (-) 216 WP_013352264.1 flagellar FlbD family protein -
  BAXH7_RS08740 (BAXH7_01833) flgG 1781698..1782474 (-) 777 WP_013352263.1 flagellar basal body rod protein FlgG -
  BAXH7_RS08745 (BAXH7_01834) flgD 1782499..1782930 (-) 432 WP_013352262.1 flagellar hook assembly protein FlgD -

Sequence

Protein


Download         Length: 120 a.a.        Molecular weight: 13209.53 Da        Isoelectric Point: 4.6805

>NTDB_id=35816 BAXH7_RS08715 WP_003154238.1 1778483..1778845(-) (pilH) [Bacillus amyloliquefaciens XH7]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS

Nucleotide


Download         Length: 363 bp        

>NTDB_id=35816 BAXH7_RS08715 WP_003154238.1 1778483..1778845(-) (pilH) [Bacillus amyloliquefaciens XH7]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTCAAAGAGCATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A150FA43

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilH Synechocystis sp. PCC 6803

38.983

98.333

0.383