Detailed information NTG0358115

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: E7Z57_RS16355
• Genome accession: NZ_CP039339
• Coordinates: 3430117..3431256 (-)
• Length: 379 a.a.
• NCBI ID: WP_064050373.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain UW386
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3425117..3436256

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E7Z57_RS16325 (E7Z57_16325)	-	3425817..3427079 (-)	1263	WP_138929559.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
E7Z57_RS16335 (E7Z57_16335)	-	3427356..3427982 (-)	627	WP_138929561.1	ANTAR domain-containing response regulator	-
E7Z57_RS16340 (E7Z57_16340)	-	3428130..3428831 (+)	702	WP_064050376.1	fumarylacetoacetate hydrolase family protein	-
E7Z57_RS16345 (E7Z57_16345)	maiA	3428835..3429485 (+)	651	WP_064050375.1	maleylacetoacetate isomerase	-
E7Z57_RS16350 (E7Z57_16350)	-	3429482..3430120 (+)	639	WP_138929562.1	LysE/ArgO family amino acid transporter	-
E7Z57_RS16355 (E7Z57_16355)	pilA	3430117..3431256 (-)	1140	WP_064050373.1	signal recognition particle-docking protein FtsY	Machinery gene
E7Z57_RS16360 (E7Z57_16360)	-	3431317..3432828 (+)	1512	WP_064050372.1	M16 family metallopeptidase	-
E7Z57_RS16365 (E7Z57_16365)	-	3432828..3434171 (+)	1344	WP_064050371.1	M16 family metallopeptidase	-
E7Z57_RS16370 (E7Z57_16370)	rsmD	3434251..3434898 (+)	648	WP_064050370.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
E7Z57_RS16375 (E7Z57_16375)	coaD	3435094..3435600 (+)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
E7Z57_RS16380 (E7Z57_16380)	-	3435651..3435899 (+)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40171.39 Da
• Isoelectric Point: 5.8101

>NTDB_id=358115 E7Z57_RS16355 WP_064050373.1 3430117..3431256(-) (pilA) [Ralstonia pseudosolanacearum strain UW386]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPTAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1140 bp

>NTDB_id=358115 E7Z57_RS16355 WP_064050373.1 3430117..3431256(-) (pilA) [Ralstonia pseudosolanacearum strain UW386]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCCCCGGCCCCTGCCCCGGTCGCCGCCCCCGTTCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGACCGCGCCGGCTGCGCTGGACATGCAGGCCGACGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCGCGCAAGGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGTGT
GAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAATACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGATCTG
CTCATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCACAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCTGTGAACGCGGCGCGTGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTGCCAGTGTATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCG
CCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (179-379)

• SRP54-type protein, helical bundle domain (SRP54_N) (98-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.923	100	0.57