Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   E4T61_RS19830 Genome accession   NZ_CP039297
Coordinates   358013..358177 (+) Length   54 a.a.
NCBI ID   WP_012116773.1    Uniprot ID   -
Organism   Bacillus velezensis isolate UFLA258     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 353013..363177
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E4T61_RS19825 srfAB 354958..357948 (+) 2991 Protein_321 surfactin non-ribosomal peptide synthetase SrfAB -
  E4T61_RS19830 comS 358013..358177 (+) 165 WP_012116773.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6153.16 Da        Isoelectric Point: 12.0559

>NTDB_id=358053 E4T61_RS19830 WP_012116773.1 358013..358177(+) (comS) [Bacillus velezensis isolate UFLA258]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=358053 E4T61_RS19830 WP_012116773.1 358013..358177(+) (comS) [Bacillus velezensis isolate UFLA258]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5

Multiple sequence alignment