Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   E4T61_RS07255 Genome accession   NZ_CP039297
Coordinates   1389263..1389727 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis isolate UFLA258     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1384263..1394727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E4T61_RS07235 (E4T61_07235) - 1384743..1386563 (+) 1821 WP_015239755.1 PAS domain-containing protein -
  E4T61_RS07240 (E4T61_07240) - 1386588..1387757 (-) 1170 WP_007611083.1 aminotransferase A -
  E4T61_RS19705 - 1387958..1388119 (-) 162 WP_007409608.1 hypothetical protein -
  E4T61_RS07250 (E4T61_07250) cheV 1388308..1389219 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  E4T61_RS07255 (E4T61_07255) kre 1389263..1389727 (-) 465 WP_003154622.1 YkyB family protein Regulator
  E4T61_RS07260 (E4T61_07260) - 1389850..1391142 (-) 1293 WP_015239757.1 MFS transporter -
  E4T61_RS07265 (E4T61_07265) - 1391218..1391712 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  E4T61_RS07270 (E4T61_07270) - 1391787..1392650 (-) 864 WP_015239758.1 metallophosphoesterase -
  E4T61_RS07275 (E4T61_07275) fadH 1392795..1393559 (+) 765 WP_136396329.1 2,4-dienoyl-CoA reductase -
  E4T61_RS07280 (E4T61_07280) - 1393724..1394219 (+) 496 Protein_1372 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=358006 E4T61_RS07255 WP_003154622.1 1389263..1389727(-) (kre) [Bacillus velezensis isolate UFLA258]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=358006 E4T61_RS07255 WP_003154622.1 1389263..1389727(-) (kre) [Bacillus velezensis isolate UFLA258]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAGTCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment