Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | DZ927_RS27420 | Genome accession | NZ_CP039293 |
| Coordinates | 5678362..5678919 (+) | Length | 185 a.a. |
| NCBI ID | WP_019486632.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain PABL048 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5673362..5683919
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DZ927_RS27400 (DZ927_027400) | pilR | 5674638..5675975 (+) | 1338 | WP_003110427.1 | two-component system response regulator PilR | Regulator |
| DZ927_RS27405 (DZ927_027405) | thiO | 5676021..5677115 (-) | 1095 | WP_023094393.1 | glycine oxidase ThiO | - |
| DZ927_RS27410 (DZ927_027410) | - | 5677250..5677759 (+) | 510 | WP_019486634.1 | Tfp pilus assembly protein FimT/FimU | - |
| DZ927_RS27415 (DZ927_027415) | - | 5677865..5678371 (+) | 507 | WP_019486633.1 | Tfp pilus assembly protein FimT/FimU | - |
| DZ927_RS27420 (DZ927_027420) | pilV | 5678362..5678919 (+) | 558 | WP_019486632.1 | type 4a pilus minor pilin PilV | Machinery gene |
| DZ927_RS27425 (DZ927_027425) | pilW | 5678916..5679740 (+) | 825 | WP_023094394.1 | type 4a pilus minor pilin PilW | - |
| DZ927_RS27430 (DZ927_027430) | pilX | 5679737..5680324 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| DZ927_RS27435 (DZ927_027435) | pilY1 | 5680336..5683821 (+) | 3486 | WP_019486630.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20086.26 Da Isoelectric Point: 7.9204
>NTDB_id=357932 DZ927_RS27420 WP_019486632.1 5678362..5678919(+) (pilV) [Pseudomonas aeruginosa strain PABL048]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPTSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPTSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=357932 DZ927_RS27420 WP_019486632.1 5678362..5678919(+) (pilV) [Pseudomonas aeruginosa strain PABL048]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGAATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGACCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGAATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGACCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
97.838 |
100 |
0.978 |