Detailed information
Bioinformatically predicted
Overview
| Name | recU | Type | Machinery gene |
| Locus tag | GQY29_RS01660 | Genome accession | NZ_CP047191 |
| Coordinates | 320071..320667 (+) | Length | 198 a.a. |
| NCBI ID | WP_002949408.1 | Uniprot ID | Q5M648 |
| Organism | Streptococcus thermophilus strain EU01 | ||
| Function | plasmid transformation; homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 315071..325667
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQY29_RS01635 (GQY29_01635) | - | 315470..317332 (-) | 1863 | WP_014607934.1 | cell division site-positioning protein MapZ family protein | - |
| GQY29_RS01640 (GQY29_01640) | - | 317335..318501 (-) | 1167 | WP_014607933.1 | class I SAM-dependent RNA methyltransferase | - |
| GQY29_RS01650 (GQY29_01650) | gpsB | 319038..319370 (-) | 333 | WP_014607932.1 | cell division regulator GpsB | - |
| GQY29_RS01655 (GQY29_01655) | - | 319479..319994 (-) | 516 | WP_002949411.1 | DUF1273 domain-containing protein | - |
| GQY29_RS01660 (GQY29_01660) | recU | 320071..320667 (+) | 597 | WP_002949408.1 | Holliday junction resolvase RecU | Machinery gene |
| GQY29_RS01665 (GQY29_01665) | pbp1a | 320667..322982 (+) | 2316 | WP_064355652.1 | penicillin-binding protein PBP1A | - |
| GQY29_RS01670 (GQY29_01670) | pepC | 323092..324429 (-) | 1338 | WP_011680700.1 | aminopeptidase C | - |
| GQY29_RS01675 (GQY29_01675) | - | 324531..324971 (-) | 441 | WP_011225416.1 | DUF805 domain-containing protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 22827.38 Da Isoelectric Point: 10.1106
>NTDB_id=357865 GQY29_RS01660 WP_002949408.1 320071..320667(+) (recU) [Streptococcus thermophilus strain EU01]
MVNYPHQISRKIAQVRTKKSNRVDFANRGMNFESAINATNDYYLSRGLAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQ
ASTTDYSGVYKGYYIDFEAKETRQKTSMPMKNFHAHQIKHMSQVINQDGICFVLLHFSTLKETYLLPAKDLIAFYQIDKG
TKSMPLDYIKKRGYAIAESAYPQVPYLEIIEKLLGGNT
MVNYPHQISRKIAQVRTKKSNRVDFANRGMNFESAINATNDYYLSRGLAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQ
ASTTDYSGVYKGYYIDFEAKETRQKTSMPMKNFHAHQIKHMSQVINQDGICFVLLHFSTLKETYLLPAKDLIAFYQIDKG
TKSMPLDYIKKRGYAIAESAYPQVPYLEIIEKLLGGNT
Nucleotide
Download Length: 597 bp
>NTDB_id=357865 GQY29_RS01660 WP_002949408.1 320071..320667(+) (recU) [Streptococcus thermophilus strain EU01]
ATGGTAAACTATCCCCATCAGATATCTCGTAAGATAGCACAAGTACGTACTAAAAAATCTAATAGAGTTGACTTTGCCAA
TCGGGGGATGAACTTTGAATCTGCTATTAATGCGACTAATGATTACTATTTGTCGCGTGGCTTAGCCGTTATTCATAAGA
AACCTACACCGGTTCAGATCGTCAAAGTCGATTATCCAAAACGCTCACGAGCAAAGATTGTAGAAGCTTACTTTAGGCAA
GCCTCAACTACTGACTACTCTGGCGTTTACAAAGGATACTATATTGATTTTGAAGCCAAAGAGACACGGCAAAAGACATC
TATGCCTATGAAAAACTTTCATGCGCATCAAATTAAGCACATGTCTCAGGTCATCAATCAAGATGGAATCTGCTTCGTGC
TACTCCACTTTTCAACGCTTAAGGAAACCTACCTTCTGCCTGCCAAAGACTTAATCGCTTTTTATCAAATTGATAAGGGG
ACAAAATCAATGCCTCTTGATTATATCAAAAAAAGAGGTTATGCAATCGCAGAATCAGCTTATCCTCAAGTTCCTTATTT
AGAGATCATTGAAAAATTATTAGGTGGTAACACATAA
ATGGTAAACTATCCCCATCAGATATCTCGTAAGATAGCACAAGTACGTACTAAAAAATCTAATAGAGTTGACTTTGCCAA
TCGGGGGATGAACTTTGAATCTGCTATTAATGCGACTAATGATTACTATTTGTCGCGTGGCTTAGCCGTTATTCATAAGA
AACCTACACCGGTTCAGATCGTCAAAGTCGATTATCCAAAACGCTCACGAGCAAAGATTGTAGAAGCTTACTTTAGGCAA
GCCTCAACTACTGACTACTCTGGCGTTTACAAAGGATACTATATTGATTTTGAAGCCAAAGAGACACGGCAAAAGACATC
TATGCCTATGAAAAACTTTCATGCGCATCAAATTAAGCACATGTCTCAGGTCATCAATCAAGATGGAATCTGCTTCGTGC
TACTCCACTTTTCAACGCTTAAGGAAACCTACCTTCTGCCTGCCAAAGACTTAATCGCTTTTTATCAAATTGATAAGGGG
ACAAAATCAATGCCTCTTGATTATATCAAAAAAAGAGGTTATGCAATCGCAGAATCAGCTTATCCTCAAGTTCCTTATTT
AGAGATCATTGAAAAATTATTAGGTGGTAACACATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recU | Bacillus subtilis subsp. subtilis str. 168 |
49.754 |
100 |
0.51 |