Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   GR130_RS36885 Genome accession   NZ_CP047146
Coordinates   8487985..8489109 (+) Length   374 a.a.
NCBI ID   WP_159508720.1    Uniprot ID   -
Organism   Streptomyces sp. GS7     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 8482985..8494109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GR130_RS36870 (GR130_36870) - 8483514..8484389 (+) 876 WP_159508717.1 hypothetical protein -
  GR130_RS36875 (GR130_36875) - 8484411..8486240 (-) 1830 WP_159508718.1 sigma-70 family RNA polymerase sigma factor -
  GR130_RS36880 (GR130_36880) radA/sms 8486439..8487851 (+) 1413 WP_159508719.1 DNA repair protein RadA Machinery gene
  GR130_RS36885 (GR130_36885) disA 8487985..8489109 (+) 1125 WP_159508720.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  GR130_RS36890 (GR130_36890) - 8489223..8490209 (-) 987 WP_159508721.1 NAD-dependent epimerase/dehydratase family protein -
  GR130_RS36895 (GR130_36895) - 8490386..8491240 (-) 855 WP_159508722.1 hypothetical protein -
  GR130_RS36900 (GR130_36900) - 8491688..8492191 (-) 504 WP_159508723.1 pyridoxamine 5'-phosphate oxidase family protein -
  GR130_RS36905 (GR130_36905) - 8492349..8493308 (+) 960 WP_159508724.1 A/G-specific adenine glycosylase -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40215.95 Da        Isoelectric Point: 4.9271

>NTDB_id=357715 GR130_RS36885 WP_159508720.1 8487985..8489109(+) (disA) [Streptomyces sp. GS7]
MAANDRASSPGRSGGSSGTESLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVESMCTGGFALDVEFSATRLR
ELCKLDGALVLDKDITKILRAGVQLVPDASIPTEETGTRHRTAQRVSIQTNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPERELVARDYVPEPTAKRSRTVAEALADLDALSHPELLELPIVARALGYSGAPETLDSAVSPRGFRLLAKVPRLPGT
VIDRLVDHFGGLQKLLAASVDDLQAVDGVGETRARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=357715 GR130_RS36885 WP_159508720.1 8487985..8489109(+) (disA) [Streptomyces sp. GS7]
GTGGCAGCCAACGACCGGGCATCGTCTCCCGGCAGGTCCGGAGGGAGCTCCGGCACCGAGAGCCTGATGCGCGCCTCGCT
GAGCGCCGTCGCGCCCGGTACGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGGGGCAACACGGGCGGCCTGATCGTCC
TCGGCTTCGACAAGACCGTCGAGTCCATGTGCACCGGCGGTTTCGCGCTGGACGTCGAGTTCAGCGCCACCCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGGTCCTCGACAAGGACATCACCAAGATCCTCCGCGCCGGCGTCCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACCGCCCAGCGGGTCTCCATCCAGACGAACTTCCCGG
TGGTCTCGGTCAGCCAGTCCATGCGGCTGATCGCGCTCTACGTGGACGGTGAGCGGCGCGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCGCTGGCCACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCCGGCACCCTCTC
CGCCCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTCAGCGCCGTCGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTCGTCGAACTGGGCACCGACGGCCGCCTGCTGGCCCTCCAGCTGGAGGAGCTGATCGCC
GGTGTGGAGCCGGAGCGCGAGCTGGTCGCCCGCGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGCCGA
GGCGCTGGCCGACCTGGACGCGCTCAGCCACCCCGAGCTGCTCGAACTCCCCATAGTGGCCCGCGCGTTGGGCTACAGCG
GCGCCCCCGAGACGCTGGACTCCGCGGTCTCCCCGCGCGGCTTCCGCCTGCTGGCGAAGGTCCCCCGGCTCCCCGGCACG
GTCATCGACCGCCTCGTCGATCACTTCGGCGGCCTCCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGGCGGTCGA
CGGCGTCGGCGAGACCCGCGCCCGCTCGGTCCGCGAGGGCCTGTCCCGGCTGGCGGAGTCGTCGATCCTGGAACGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.665

92.513

0.422


Multiple sequence alignment