Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   GR130_RS36385 Genome accession   NZ_CP047146
Coordinates   8384856..8386589 (-) Length   577 a.a.
NCBI ID   WP_159508638.1    Uniprot ID   -
Organism   Streptomyces sp. GS7     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 8379856..8391589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GR130_RS36365 (GR130_36365) - 8379915..8380940 (-) 1026 WP_159508636.1 LacI family DNA-binding transcriptional regulator -
  GR130_RS36370 (GR130_36370) - 8380965..8381798 (-) 834 WP_159508637.1 response regulator transcription factor -
  GR130_RS41170 (GR130_36375) - 8382123..8382459 (+) 337 Protein_7283 alpha/beta hydrolase -
  GR130_RS41470 - 8382596..8382718 (+) 123 WP_268977950.1 hypothetical protein -
  GR130_RS36380 (GR130_36380) rcrQ 8382829..8384730 (-) 1902 WP_159510453.1 ABC transporter ATP-binding protein Regulator
  GR130_RS36385 (GR130_36385) rcrP 8384856..8386589 (-) 1734 WP_159508638.1 ABC transporter ATP-binding protein Regulator
  GR130_RS36390 (GR130_36390) - 8386776..8387021 (+) 246 WP_159510454.1 MoaD/ThiS family protein -
  GR130_RS36395 (GR130_36395) - 8387032..8388297 (+) 1266 WP_159508639.1 hypothetical protein -
  GR130_RS36400 (GR130_36400) - 8388550..8389251 (+) 702 WP_159508640.1 DUF2993 domain-containing protein -
  GR130_RS36405 (GR130_36405) - 8389743..8390588 (+) 846 WP_159508641.1 sulfurtransferase -
  GR130_RS36410 (GR130_36410) - 8390630..8390932 (+) 303 WP_159508642.1 DUF1416 domain-containing protein -
  GR130_RS36415 (GR130_36415) - 8391127..8391426 (+) 300 WP_159508643.1 DUF3099 domain-containing protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62998.48 Da        Isoelectric Point: 6.1917

>NTDB_id=357713 GR130_RS36385 WP_159508638.1 8384856..8386589(-) (rcrP) [Streptomyces sp. GS7]
MLVRLARAHLRPYRRSISLIVLLQLIQTLATLYLPTLNADIIDNGVVKNDTGYILRVGVFMIVVTALQVVCAIAAVYFGA
RTAMGLGRDIRAAIFDQVQSFSAREVGTFGAPSLITRTTNDVQQVQMLVLMTFTMMVSAPIMCVGGILMALDQDVPLSAL
LLVIIPFLGILLGLIVRRMRPLFRGVQTRIDTVNRVLREQITGIRVIRAFVRDRYERERFAAANTDLYDVSLRAGRLMST
LIPLVMLIVNLSSVAVVWFGGLRIDGGEMQIGALTAFLSYLMYILMSIMMATFMVMMLPRAEVCAERIQEVLATDSSVTP
PANPVTALRRHGELELRNVEFRFPGAEQPVLKDVSLVARPGETTAVIGSTGSGKSTLLGLVPRLFDATGGTVLVDGEDVR
TLDQETLADLIGLVPQKPYLFSGTVASNLRYGNPEATDDELWHALEIAQARDFVERMDGGLDAAIAQGGSNVSGGQRQRL
AIARALVRKPEIYLFDDSFSALDYATDAALRAALSRETDRATVVIVAQRVATIRGADRIVVLDEGRIVGTGTHAELMAGN
ETYREIVLSQLTEQEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=357713 GR130_RS36385 WP_159508638.1 8384856..8386589(-) (rcrP) [Streptomyces sp. GS7]
GTGTTGGTCCGACTCGCGCGGGCGCATCTGCGGCCCTATAGGCGCTCGATATCCCTCATCGTTCTGCTCCAGCTGATCCA
GACGCTGGCGACCCTCTATTTGCCCACCCTCAATGCCGACATCATCGACAACGGTGTCGTCAAGAACGACACGGGCTACA
TCCTCCGCGTCGGCGTGTTCATGATCGTCGTGACGGCGCTGCAGGTCGTGTGCGCCATCGCCGCGGTCTACTTCGGTGCC
CGTACGGCCATGGGGCTCGGCCGGGACATCCGGGCCGCGATCTTCGACCAGGTGCAGTCCTTCTCCGCGCGGGAGGTGGG
CACGTTCGGCGCGCCGTCGCTGATCACCCGCACCACCAACGACGTCCAGCAGGTGCAGATGCTGGTGCTGATGACCTTCA
CGATGATGGTCTCGGCGCCGATCATGTGCGTCGGCGGCATCCTCATGGCGCTCGACCAGGACGTGCCGCTGTCGGCCCTC
CTCCTGGTCATCATCCCGTTCCTCGGGATCCTCCTCGGGCTGATCGTGCGCCGGATGCGTCCGCTGTTCCGCGGCGTGCA
GACCCGCATCGACACCGTCAACCGCGTGCTGCGCGAGCAGATCACGGGCATCCGCGTCATCCGGGCCTTCGTCCGCGACC
GGTACGAGCGCGAGCGGTTCGCCGCCGCCAACACCGATCTGTACGACGTGTCGCTGCGCGCCGGCCGGCTGATGTCGACG
CTGATCCCGTTGGTCATGCTGATCGTGAACCTCTCCAGCGTGGCCGTGGTGTGGTTCGGCGGACTGCGCATCGACGGCGG
CGAGATGCAGATCGGCGCGCTGACCGCGTTCCTCAGCTACCTGATGTACATCCTGATGTCGATCATGATGGCGACGTTCA
TGGTGATGATGCTGCCGCGCGCGGAGGTCTGCGCCGAGCGCATCCAGGAGGTGCTGGCCACCGACTCCAGCGTCACCCCG
CCCGCGAACCCGGTCACCGCGCTGCGCCGGCACGGCGAACTGGAGCTGCGCAACGTCGAGTTCCGCTTCCCCGGCGCCGA
GCAGCCGGTGCTCAAGGACGTCTCCCTGGTCGCCCGCCCCGGCGAGACCACCGCCGTCATCGGCTCGACCGGCTCCGGCA
AGTCGACCCTCCTCGGGCTCGTACCGCGACTGTTCGACGCGACCGGCGGCACGGTCCTGGTGGACGGCGAGGACGTCCGC
ACCCTGGACCAGGAGACGCTGGCCGACCTCATCGGCCTGGTCCCGCAGAAGCCGTACCTCTTCTCCGGGACGGTCGCGAG
CAATCTGCGGTACGGCAATCCGGAGGCCACCGACGACGAGCTGTGGCACGCGCTGGAGATCGCCCAGGCGCGCGACTTCG
TCGAGCGGATGGACGGCGGGCTGGACGCGGCCATCGCACAGGGCGGCTCCAACGTCTCCGGCGGCCAGCGGCAGCGACTG
GCCATCGCGCGGGCACTGGTCCGCAAGCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTGGACTACGCCACGGA
CGCCGCCCTGCGCGCCGCGCTGTCCCGTGAGACGGACCGGGCCACCGTGGTGATCGTCGCCCAGCGCGTCGCGACGATCC
GCGGCGCCGACCGGATCGTGGTCCTCGACGAGGGCCGGATCGTCGGCACCGGTACCCACGCCGAGCTGATGGCCGGCAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTCACCGAGCAGGAGGCGGCGTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(19-287)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.721

97.574

0.378