Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GR130_RS36380 Genome accession   NZ_CP047146
Coordinates   8382829..8384730 (-) Length   633 a.a.
NCBI ID   WP_159510453.1    Uniprot ID   -
Organism   Streptomyces sp. GS7     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 8377829..8389730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GR130_RS36360 (GR130_36360) - 8378656..8379783 (-) 1128 WP_159508635.1 trypsin-like peptidase domain-containing protein -
  GR130_RS36365 (GR130_36365) - 8379915..8380940 (-) 1026 WP_159508636.1 LacI family DNA-binding transcriptional regulator -
  GR130_RS36370 (GR130_36370) - 8380965..8381798 (-) 834 WP_159508637.1 response regulator transcription factor -
  GR130_RS41170 (GR130_36375) - 8382123..8382459 (+) 337 Protein_7283 alpha/beta hydrolase -
  GR130_RS41470 - 8382596..8382718 (+) 123 WP_268977950.1 hypothetical protein -
  GR130_RS36380 (GR130_36380) rcrQ 8382829..8384730 (-) 1902 WP_159510453.1 ABC transporter ATP-binding protein Regulator
  GR130_RS36385 (GR130_36385) rcrP 8384856..8386589 (-) 1734 WP_159508638.1 ABC transporter ATP-binding protein Regulator
  GR130_RS36390 (GR130_36390) - 8386776..8387021 (+) 246 WP_159510454.1 MoaD/ThiS family protein -
  GR130_RS36395 (GR130_36395) - 8387032..8388297 (+) 1266 WP_159508639.1 hypothetical protein -
  GR130_RS36400 (GR130_36400) - 8388550..8389251 (+) 702 WP_159508640.1 DUF2993 domain-containing protein -

Sequence

Protein


Download         Length: 633 a.a.        Molecular weight: 68256.78 Da        Isoelectric Point: 5.8995

>NTDB_id=357712 GR130_RS36380 WP_159510453.1 8382829..8384730(-) (rcrQ) [Streptomyces sp. GS7]
MMSGPIDKSLDFKNSGRRLLAQMRPERGLITVALLLGVLSVALTVVGPKVLGRATDLIMAGIVGRQLPAGITKAQAVDQL
RAHGQGGLADMLGTMPVVPGHGIDFGAVGTVLLWVTLIYVGSSVFGFVQARIATLLAQRTVFRLREQVEEKLARLPLSYF
DKQQRGEVLSRATNDIDNVQQTLQQTLSQIVVSVLTILGVLVMMFWISPLLALVALVTVPVSVVVAAKIGKRAQPQFVQQ
WMTTGKLNAHIEEMYTGHSLVKVFGRQRESAALFREQNEALYAAGFKAQFISGIIQPAMMFIGNLNYVLVAVVGGLRVAS
GALSIGDVQAFIQYSRQFSQPLTQVASMANLVQSCVASAERVFELLDAPEQAPDPERPVRPDEVRGRVAFEDVSFRYDEN
KPLIDGLSLAVHPGQTVAIVGPTGAGKTTLVNLLMRFYEVSGGRITLDGVDIAGMSREELRGNIGMVLQDTWLFGGTIAE
NIAYGAPEGTSRDKVVEAARATHVDRFVRTLPDGYDTVIDEEGGNVSAGEKQLITIARAFLAEPAILVLDEATSSVDTRT
EVLIQHAMAQLRTGRTSFVIAHRLSTIRDADVILVMENGAIVEQGSHDALLAADGAYARLYAAQFAEAVAETE

Nucleotide


Download         Length: 1902 bp        

>NTDB_id=357712 GR130_RS36380 WP_159510453.1 8382829..8384730(-) (rcrQ) [Streptomyces sp. GS7]
ATGATGAGCGGCCCGATCGACAAGTCGCTCGACTTCAAGAACTCCGGCCGGCGGCTGCTGGCCCAGATGCGGCCGGAGCG
CGGCCTCATCACCGTCGCGCTGCTGCTGGGCGTCCTGAGCGTGGCGCTGACGGTCGTCGGGCCCAAGGTCCTCGGCCGGG
CCACCGACCTGATCATGGCGGGCATCGTGGGCCGCCAGCTGCCGGCCGGCATCACCAAGGCGCAGGCCGTCGACCAGTTG
CGGGCGCACGGCCAGGGCGGGCTCGCCGACATGCTCGGCACGATGCCGGTGGTCCCCGGCCACGGCATCGACTTCGGCGC
CGTCGGCACGGTCCTGCTCTGGGTCACGCTGATCTACGTCGGCTCGTCCGTCTTCGGCTTCGTCCAGGCCCGGATCGCCA
CCCTGCTCGCGCAGCGCACGGTCTTCCGGCTGCGCGAGCAGGTCGAGGAGAAGCTGGCCCGGCTGCCGCTGAGCTACTTC
GACAAGCAGCAGCGCGGCGAGGTGCTGTCCCGCGCGACCAACGACATCGACAACGTCCAGCAGACGCTCCAGCAGACCCT
CAGCCAGATCGTGGTGTCGGTGCTGACGATCCTGGGCGTGCTGGTCATGATGTTCTGGATCTCGCCGCTGTTGGCGCTCG
TCGCGCTGGTGACCGTGCCGGTCTCGGTCGTGGTCGCCGCCAAGATCGGCAAGCGGGCGCAGCCGCAGTTCGTCCAGCAG
TGGATGACGACCGGCAAGCTGAACGCACACATCGAGGAGATGTACACCGGCCACTCGCTGGTCAAGGTCTTCGGCCGCCA
GCGGGAGTCCGCCGCGCTGTTCCGCGAGCAGAACGAGGCGCTCTACGCCGCCGGGTTCAAGGCCCAGTTCATCTCCGGGA
TCATCCAGCCCGCGATGATGTTCATCGGGAACCTCAACTACGTCCTGGTGGCGGTGGTCGGCGGCCTCCGCGTCGCCTCC
GGCGCGCTGTCCATCGGTGACGTGCAGGCGTTCATCCAGTACTCCCGCCAGTTCAGCCAGCCGCTGACCCAGGTCGCCTC
GATGGCCAACCTCGTCCAGTCCTGTGTCGCCTCCGCCGAGCGGGTCTTCGAACTCCTCGACGCCCCGGAGCAGGCCCCGG
ACCCCGAGCGGCCGGTCCGCCCCGACGAGGTCAGGGGCCGGGTCGCCTTCGAGGACGTGTCCTTCCGCTACGACGAGAAC
AAGCCGCTCATCGACGGCCTCTCGCTGGCCGTCCACCCCGGCCAGACCGTCGCGATCGTCGGCCCGACCGGCGCGGGCAA
GACCACCCTGGTCAACCTGCTGATGCGGTTCTACGAGGTCAGCGGCGGCCGGATCACCCTGGACGGCGTCGACATCGCCG
GGATGTCCCGCGAGGAGCTGCGCGGCAACATCGGCATGGTCCTCCAGGACACCTGGCTGTTCGGCGGCACCATCGCCGAG
AACATCGCCTACGGCGCCCCCGAGGGCACCTCCCGCGACAAGGTCGTCGAGGCCGCCCGGGCCACCCACGTCGACCGGTT
CGTCCGCACCCTGCCCGACGGCTACGACACCGTCATCGACGAGGAGGGCGGCAACGTCTCGGCCGGCGAGAAGCAGCTGA
TCACCATCGCGCGAGCGTTCCTCGCCGAGCCGGCCATCCTCGTCCTGGACGAGGCCACCAGCTCGGTCGACACCCGCACC
GAGGTCCTCATCCAGCACGCGATGGCCCAACTCCGCACCGGCCGCACCAGCTTCGTCATCGCGCACCGGCTCTCCACCAT
CCGCGACGCGGACGTCATCCTGGTGATGGAGAACGGCGCGATCGTCGAACAGGGCTCGCACGACGCCCTGCTGGCGGCCG
ACGGCGCCTACGCCCGGCTGTACGCGGCGCAGTTCGCGGAGGCGGTGGCGGAGACCGAGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(31-342)

ABC transporter (ABC_tran)

(405-554)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

40.997

98.262

0.403