Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   GR130_RS30705 Genome accession   NZ_CP047146
Coordinates   7077399..7078196 (+) Length   265 a.a.
NCBI ID   WP_043266465.1    Uniprot ID   -
Organism   Streptomyces sp. GS7     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 7072399..7083196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GR130_RS30695 (GR130_30695) - 7073299..7076172 (-) 2874 WP_159507712.1 vitamin B12-dependent ribonucleotide reductase -
  GR130_RS30700 (GR130_30700) nrdR 7076294..7076824 (-) 531 WP_159507713.1 transcriptional regulator NrdR -
  GR130_RS30705 (GR130_30705) dinR/lexA 7077399..7078196 (+) 798 WP_043266465.1 transcriptional repressor LexA Regulator
  GR130_RS30710 (GR130_30710) - 7078312..7080279 (-) 1968 WP_159507714.1 ATP-dependent DNA helicase -
  GR130_RS30715 (GR130_30715) - 7080322..7082106 (-) 1785 WP_159507715.1 IucA/IucC family protein -
  GR130_RS30720 (GR130_30720) - 7082212..7082910 (-) 699 WP_159507716.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 28751.42 Da        Isoelectric Point: 7.4240

>NTDB_id=357690 GR130_RS30705 WP_043266465.1 7077399..7078196(+) (dinR/lexA) [Streptomyces sp. GS7]
MTTTADSATITAQSHSQSRFEQPQRAQRPMDDATSGSEENKPTRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGY
PPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPTSAATETAGKPAASYVPLVGRIAAGGPILA
EESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPH
NSAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 798 bp        

>NTDB_id=357690 GR130_RS30705 WP_043266465.1 7077399..7078196(+) (dinR/lexA) [Streptomyces sp. GS7]
GTGACCACCACCGCAGACAGCGCGACCATCACCGCACAGAGCCACTCCCAGAGCCGATTCGAACAACCGCAAAGGGCACA
GCGGCCGATGGATGACGCCACGTCGGGCTCCGAAGAGAACAAGCCGACCCGCTCGCTTCCGGGACGCCCCCCGGGAATTC
GCGCCGACAGCTCCGGGCTCACCGATCGCCAGCGCCGGGTGATCGAGGTGATCCGGGATTCGGTGCAGCGGCGCGGCTAT
CCACCGTCGATGCGCGAGATCGGCCAGGCGGTCGGGCTGTCCAGCACCTCCTCCGTCGCCCATCAGCTGATGGCGCTGGA
GCGCAAGGGCTTCCTGCGGCGCGACCCGCACCGCCCGCGGGCGTACGAGGTCCGCGGCTCCGACCAGCCCACGAGCGCGG
CGACGGAGACCGCCGGCAAGCCCGCCGCGTCCTACGTCCCCCTGGTCGGCCGGATCGCGGCCGGTGGCCCGATCCTCGCC
GAGGAATCCGTCGAGGACGTCTTCCCGCTCCCCCGCCAGCTGGTCGGTGACGGCGAGCTGTTCGTGCTGAAGGTCGTCGG
CGACTCCATGATCGAGGCCGCGATCTGCGACGGCGACTGGGTCACCGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACA
TCGTCGCCGCGATGCTCGACGGCGAGGCGACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTGCCGCAC
AACTCCGCGTATCAGCCCATCCCCGGTGACGAGGCGACCATCCTCGGCAAGGTGGTCGCGGTGCTGCGCCGGGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(147-259)

LexA DNA binding domain (LexA_DNA_bind)

(58-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80

0.37