Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E5790_RS14860 Genome accession   NZ_CP039255
Coordinates   3196941..3197342 (+) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas sp. PAMC25021     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3191941..3202342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E5790_RS14845 (E5790_14845) tsaB 3193502..3194215 (+) 714 WP_049440310.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  E5790_RS14850 (E5790_14850) - 3194869..3195753 (-) 885 WP_014648095.1 energy transducer TonB -
  E5790_RS14855 (E5790_14855) gshB 3195753..3196700 (-) 948 WP_014648094.1 glutathione synthase -
  E5790_RS14860 (E5790_14860) pilG 3196941..3197342 (+) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  E5790_RS14865 (E5790_14865) - 3197361..3197723 (+) 363 WP_005410717.1 response regulator -
  E5790_RS14870 (E5790_14870) - 3197723..3198253 (+) 531 WP_014648092.1 chemotaxis protein CheW -
  E5790_RS14875 (E5790_14875) - 3198295..3200331 (+) 2037 WP_014038185.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=357679 E5790_RS14860 WP_005418455.1 3196941..3197342(+) (pilG) [Stenotrophomonas sp. PAMC25021]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=357679 E5790_RS14860 WP_005418455.1 3196941..3197342(+) (pilG) [Stenotrophomonas sp. PAMC25021]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCCAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTGATCATGCTGTCGTCCAAGGATGGTCTGTTCGACAAGGCGCGGGGGCGCAT
CGTCGGCTCGGAGCAATACCTGACCAAGCCTTTCACGCGCGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment