Detailed information NTG0357541

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PsalN5692_RS21035
• Genome accession: NZ_CP039219
• Coordinates: 283290..284243 (-)
• Length: 317 a.a.
• NCBI ID: WP_230388980.1
• Uniprot ID: -
• Organism: Piscirickettsia salmonis strain NVI 5692
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 278290..289243

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PsalN5692_RS01380	-	278341..278610 (-)	270	WP_155066441.1	hypothetical protein	-
PsalN5692_RS01385 (PsalN5692_00284)	-	278755..279402 (-)	648	WP_155066442.1	hypothetical protein	-
PsalN5692_RS01390 (PsalN5692_00285)	-	279547..279849 (-)	303	WP_155066443.1	hypothetical protein	-
PsalN5692_RS01395 (PsalN5692_00286)	-	279868..280140 (+)	273	WP_032126239.1	transposase	-
PsalN5692_RS01400 (PsalN5692_00287)	-	280152..280862 (+)	711	WP_155066444.1	IS3 family transposase	-
PsalN5692_RS01405	-	280859..281230 (-)	372	WP_155066298.1	hypothetical protein	-
PsalN5692_RS01410	-	281266..281907 (-)	642	WP_155066445.1	transposase	-
PsalN5692_RS01415	-	281986..282135 (+)	150	WP_155066446.1	integrase core domain-containing protein	-
PsalN5692_RS01420 (PsalN5692_00289)	-	282313..282663 (+)	351	WP_155066447.1	hypothetical protein	-
PsalN5692_RS20580	-	282797..282940 (-)	144	WP_196215431.1	hypothetical protein	-
PsalN5692_RS21035	pilA	283290..284243 (-)	954	WP_230388980.1	signal recognition particle-docking protein FtsY	Machinery gene
PsalN5692_RS21695 (PsalN5692_00291)	-	285511..285639 (+)	129	WP_282435237.1	hypothetical protein	-
PsalN5692_RS21700	-	285773..285898 (-)	126	WP_282435238.1	hypothetical protein	-
PsalN5692_RS01430 (PsalN5692_00292)	-	285925..286365 (+)	441	WP_155066449.1	hypothetical protein	-
PsalN5692_RS01435 (PsalN5692_00293)	-	286571..287449 (+)	879	WP_155066450.1	YbfB/YjiJ family MFS transporter	-
PsalN5692_RS01440 (PsalN5692_00294)	-	287433..288446 (-)	1014	WP_155066451.1	transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 34410.46 Da
• Isoelectric Point: 6.5046

>NTDB_id=357541 PsalN5692_RS21035 WP_230388980.1 283290..284243(-) (pilA) [Piscirickettsia salmonis strain NVI 5692]
MEKSNTNSNNQKKQGLFARLKSGLSKTRENLASGITTLLIGEKKIDDELLEDLETQLLMADVGIDATTHIITDLTKRLDR
NELTDTQKAMEALKENLSGLLDPCNIPLEIPETKDPFVILVIGVNGAGKTTTIGKLAKYYQNQGKSVMLAAGDTFRAAAV
EQLQVWGERNDIPVVAQHTGADSASVIFDAYNSAKAHGCDILIADTAGRLHTQSNLMEELKKVKRVLGKVDNTAPHEVLL
VLDSGTGQNAINQAEQFHQAVNVSGIVMTKLDGTAKGGVIFAIAKKMKLPIRYIGVGEKIDDLRPFKSDEFIKALFG

Nucleotide

• Length: 954 bp

>NTDB_id=357541 PsalN5692_RS21035 WP_230388980.1 283290..284243(-) (pilA) [Piscirickettsia salmonis strain NVI 5692]
ATTGAAAAAAGCAACACCAATAGTAATAACCAGAAAAAGCAAGGCTTATTCGCCCGCTTAAAATCTGGTCTCAGTAAGAC
CCGTGAAAATCTGGCTTCAGGTATTACTACACTTTTAATCGGTGAGAAAAAAATCGATGATGAGCTGCTGGAAGATTTAG
AAACTCAGCTACTCATGGCAGACGTCGGCATTGATGCAACGACCCATATCATTACTGACCTAACCAAGCGTCTTGATCGA
AACGAACTTACAGATACCCAAAAAGCGATGGAAGCGCTCAAAGAAAATTTATCTGGGCTGCTCGATCCATGCAATATTCC
CCTAGAAATTCCAGAAACAAAAGATCCCTTTGTGATTTTAGTCATCGGCGTCAATGGCGCAGGGAAAACTACAACCATTG
GTAAACTTGCCAAGTATTACCAAAACCAAGGCAAAAGCGTCATGCTCGCTGCAGGTGATACCTTCCGTGCCGCCGCGGTT
GAGCAATTACAAGTCTGGGGAGAGCGTAACGATATTCCGGTAGTTGCCCAACATACAGGTGCTGATAGCGCATCAGTAAT
TTTCGATGCGTATAACTCAGCCAAAGCGCATGGTTGTGATATTTTAATTGCCGATACCGCAGGCCGACTGCATACACAAA
GCAACTTAATGGAAGAGCTTAAAAAAGTAAAGCGCGTGCTTGGCAAAGTCGACAATACAGCGCCGCATGAGGTTTTACTA
GTCCTAGACTCAGGCACCGGACAAAACGCTATTAATCAAGCTGAGCAGTTTCATCAGGCTGTCAATGTATCAGGCATTGT
CATGACTAAACTCGATGGCACGGCTAAAGGTGGGGTCATTTTTGCTATCGCTAAGAAAATGAAGTTACCTATCCGTTATA
TTGGCGTCGGCGAAAAAATTGATGATCTACGCCCTTTTAAATCAGATGAATTTATTAAGGCTTTATTTGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (116-316)

• SRP54-type protein, helical bundle domain (SRP54_N) (33-97)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	54.369	97.476	0.53