Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   E5Y90_RS01405 Genome accession   NZ_CP039143
Coordinates   306107..308329 (-) Length   740 a.a.
NCBI ID   WP_174659191.1    Uniprot ID   A0A6N0L9G6
Organism   Acinetobacter sp. 10FS3-1     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 301107..313329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E5Y90_RS01380 (E5Y90_01410) - 301360..301623 (-) 264 WP_151204805.1 YdcH family protein -
  E5Y90_RS01385 (E5Y90_01415) - 301715..302044 (-) 330 WP_151207372.1 chaperone modulator CbpM -
  E5Y90_RS01390 (E5Y90_01420) - 302538..302999 (-) 462 WP_151204803.1 DUF2147 domain-containing protein -
  E5Y90_RS01395 (E5Y90_01425) hslO 303257..304132 (-) 876 WP_151204802.1 Hsp33 family molecular chaperone HslO -
  E5Y90_RS01400 (E5Y90_01430) - 304183..306036 (-) 1854 WP_174659190.1 cation:proton antiporter -
  E5Y90_RS01405 (E5Y90_01435) priA 306107..308329 (-) 2223 WP_174659191.1 primosomal protein N' Machinery gene
  E5Y90_RS01410 (E5Y90_01440) gspF 308480..309685 (+) 1206 WP_151204799.1 type II secretion system inner membrane protein GspF -
  E5Y90_RS01415 (E5Y90_01445) gspG 309765..310232 (+) 468 WP_373688391.1 type II secretion system major pseudopilin GspG -
  E5Y90_RS01420 (E5Y90_01450) - 310517..310852 (+) 336 WP_174659192.1 hypothetical protein -
  E5Y90_RS01425 (E5Y90_01455) lnt 310910..312469 (-) 1560 WP_174659193.1 apolipoprotein N-acyltransferase -
  E5Y90_RS01430 (E5Y90_01460) - 312466..313305 (-) 840 WP_151204796.1 HlyC/CorC family transporter -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83794.89 Da        Isoelectric Point: 8.7121

>NTDB_id=357198 E5Y90_RS01405 WP_174659191.1 306107..308329(-) (priA) [Acinetobacter sp. 10FS3-1]
MPNSAPPSVPVYRVRVAVPVRLFDCFDYSLSQEQYQQAEVGARVAVSFGRQNLVGVITEKLPLDAPIDPSFKLKSITELL
DERAILDAKVLSLLTWSAQYYQFPIGEVIQTALPTLLRQGKPYNLLARTWKLLEHEAEAKIRRSEKQQEAYRILKLHPVG
TTENVLNLAGIETATLKALEKKGICCCVLEQQDFSPQPMQLAQMPLTANPEQKHAIQQILKYCKKYQAFLLDGLTGSGKT
EVYLQVMQQVLKQGQQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAETGKASIILGTRSAIYTPM
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRGHLQQCPVILGSATPSIDSYALVQQGKMQVLELNQRAGTALMPKIHI
LDLKVAQKQHGISLHLIQEIKKRLAKKEQVLVFLNRRGYAPVLICGSCGWQAQCPHCDANFTVHRQPYQHLHCHHCGTIH
RLPEQCPQCQHTELVTLGMGTGKVEEHLNELFPDSEVIRVDRDSTSRVGSWQKIYDKIQKSEPAILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIIQVAGRAGRGEHKGDVYLQTLRPDHALLNTLVNENYRAFAKQTLTERQIAQM
PPFRYAVLIRCESRDQAQNTEFLQKHAALLRQYPDLVLDIWGPIPAPMERKAGRYQSHMVLLSADRARLHYYVRSWWQNL
LQEKPSSMKLTLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=357198 E5Y90_RS01405 WP_174659191.1 306107..308329(-) (priA) [Acinetobacter sp. 10FS3-1]
ATGCCGAATTCTGCTCCCCCTTCTGTACCTGTTTACCGTGTTCGCGTTGCGGTGCCGGTACGTCTGTTTGATTGTTTTGA
CTACAGTTTAAGTCAGGAACAATATCAACAGGCCGAAGTCGGTGCCCGGGTGGCGGTTTCCTTTGGCCGGCAGAATCTGG
TCGGTGTGATTACCGAAAAGCTGCCGCTGGATGCGCCGATTGATCCCAGTTTCAAGCTTAAGTCGATTACGGAGCTCCTG
GATGAACGCGCCATTTTAGATGCTAAAGTTTTAAGTTTGTTGACATGGTCCGCACAATATTATCAATTCCCGATCGGTGA
AGTGATCCAGACCGCGCTGCCGACATTATTGCGTCAGGGAAAACCCTACAATCTGCTGGCCCGGACCTGGAAGCTTCTAG
AGCATGAGGCCGAAGCCAAAATTCGCCGCTCTGAAAAACAGCAGGAAGCTTACCGGATTTTAAAACTGCATCCGGTCGGT
ACGACTGAAAATGTACTCAATCTGGCCGGGATTGAAACCGCCACATTAAAAGCCCTGGAAAAAAAAGGCATTTGTTGCTG
TGTACTGGAGCAGCAGGATTTCAGTCCTCAGCCGATGCAGCTGGCACAGATGCCACTGACAGCCAATCCTGAACAAAAGC
ATGCGATTCAGCAAATCCTCAAATACTGCAAGAAATATCAGGCTTTTTTACTGGATGGCCTGACTGGAAGCGGAAAAACT
GAGGTCTATTTGCAGGTTATGCAGCAAGTGCTGAAGCAAGGCCAGCAGGTGCTGGTGCTGGTGCCCGAAATTGGCCTTAC
CCCCCAAACAATTAGCCGCTTTCAGTCCCGTTTTCATTGTCATATTGCCCTGCTACACTCCGGGCTGAATGACAGCAAGC
GTTTGCAAGCCTGGCAGGCCGCTGAAACTGGTAAAGCTTCGATCATACTGGGCACACGTTCCGCCATTTATACGCCAATG
CCGAATCTGGGCCTTATCATTCTGGATGAAGAACACGATCTGTCCTTTAAACAACAGGAAGGTTTTCGCTATCACGCCCG
TGATGTTGCACTGTATCGGGGGCATTTACAGCAATGTCCGGTGATTCTGGGTTCAGCAACCCCCAGTATTGACAGTTATG
CGCTGGTTCAGCAAGGCAAAATGCAGGTGCTGGAACTCAATCAACGTGCCGGTACAGCCTTAATGCCCAAAATCCATATT
CTGGATTTAAAAGTCGCCCAAAAACAGCATGGCATCAGTCTGCACCTGATTCAGGAAATTAAAAAACGCCTGGCTAAAAA
AGAGCAGGTGCTGGTCTTTCTTAATCGTCGGGGCTATGCCCCGGTACTGATCTGCGGTAGTTGTGGCTGGCAGGCCCAAT
GTCCACACTGTGATGCCAATTTCACTGTACACCGCCAACCGTATCAACATTTGCACTGTCATCACTGTGGCACCATTCAT
CGTCTACCTGAACAATGTCCGCAGTGCCAGCATACCGAACTGGTGACTTTAGGCATGGGCACCGGCAAGGTTGAAGAACA
TCTGAATGAGCTTTTTCCCGATTCTGAAGTGATCCGGGTCGACCGGGATTCCACCAGCCGGGTGGGCAGCTGGCAAAAAA
TTTATGACAAGATACAAAAAAGCGAGCCGGCTATTCTGCTCGGCACCCAGATGCTGGCCAAGGGACATCATTTTCCTTAT
GTCACGCTGGTCGCCATTCTGGATATTGATTCCGGTTTGCTCAGTGTCGATTTCCGGGCCACTGAACGTACTGCACAGCT
GATCATCCAGGTGGCAGGACGGGCAGGACGTGGTGAGCATAAGGGCGATGTCTATTTACAGACGCTCAGACCGGATCATG
CCTTACTGAATACGCTGGTCAATGAAAACTACCGCGCTTTTGCCAAGCAGACGTTAACCGAACGGCAAATTGCCCAGATG
CCACCGTTTCGTTATGCCGTGCTGATCCGCTGTGAATCCAGAGATCAGGCACAAAATACTGAATTCTTACAGAAACATGC
GGCCCTACTCAGGCAATATCCTGATCTGGTACTGGATATCTGGGGGCCGATTCCTGCTCCCATGGAACGTAAGGCCGGGC
GCTATCAATCACATATGGTCCTGCTGTCTGCAGATCGTGCCCGTTTGCATTATTATGTCAGGAGCTGGTGGCAGAACCTG
TTGCAGGAAAAGCCTTCCAGCATGAAACTGACCCTGGATATTGATCCGCAGGAACTCAGTTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

DEAD/DEAH box helicase (DEAD)

(210-371)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N0L9G6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.698

100

0.719

Multiple sequence alignment