Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E5221_RS25925 Genome accession   NZ_CP039127
Coordinates   5609437..5609838 (-) Length   133 a.a.
NCBI ID   WP_003257770.1    Uniprot ID   A0AAI8FHY9
Organism   Pseudomonas sp. A2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5604437..5614838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E5221_RS25910 (E5221_26860) - 5606407..5608431 (-) 2025 WP_230491512.1 methyl-accepting chemotaxis protein -
  E5221_RS25915 (E5221_26865) - 5608473..5609027 (-) 555 WP_003257767.1 chemotaxis protein CheW -
  E5221_RS25920 (E5221_26870) pilH 5609024..5609389 (-) 366 WP_003257768.1 twitching motility response regulator PilH -
  E5221_RS25925 (E5221_26875) pilG 5609437..5609838 (-) 402 WP_003257770.1 response regulator Regulator
  E5221_RS25930 (E5221_26880) gshB 5610051..5611004 (+) 954 WP_013974527.1 glutathione synthase -
  E5221_RS25935 (E5221_26885) - 5611096..5612001 (+) 906 WP_247846652.1 energy transducer TonB -
  E5221_RS25940 (E5221_26890) - 5612173..5612742 (+) 570 WP_247846653.1 YqgE/AlgH family protein -
  E5221_RS25945 (E5221_26895) ruvX 5612742..5613179 (+) 438 WP_013974530.1 Holliday junction resolvase RuvX -
  E5221_RS25950 (E5221_26900) pyrR 5613229..5613747 (+) 519 WP_003257772.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  E5221_RS25955 (E5221_26905) - 5613760..5614764 (+) 1005 WP_003257774.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14576.82 Da        Isoelectric Point: 6.4772

>NTDB_id=357190 E5221_RS25925 WP_003257770.1 5609437..5609838(-) (pilG) [Pseudomonas sp. A2]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAAQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=357190 E5221_RS25925 WP_003257770.1 5609437..5609838(-) (pilG) [Pseudomonas sp. A2]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCGCGCACGATCCGCCGCACCGCACAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGTGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCAGCATCATCTTCG
TCGATGTGTTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGGTGATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTCATTCTGCTTTCGTCACGTGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCACGTGCCCGGTTTTGCCGCAGCCCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632

Multiple sequence alignment