Detailed information NTG0357137

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: GQ584_RS16620
• Genome accession: NZ_CP047057
• Coordinates: 3461488..3462693 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli NC101
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3456488..3467693

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQ584_RS16605 (GQ584_16415)	-	3457003..3458679 (+)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-
GQ584_RS16610 (GQ584_16420)	kdsB	3458689..3459429 (+)	741	WP_000030761.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GQ584_RS16615 (GQ584_16425)	-	3459426..3461453 (+)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
GQ584_RS16620 (GQ584_16430)	kpsS	3461488..3462693 (+)	1206	WP_001161835.1	capsule biosynthesis protein	Regulator
GQ584_RS16625 (GQ584_16435)	-	3462843..3464072 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
GQ584_RS16630 (GQ584_16440)	-	3464062..3465210 (-)	1149	WP_000197080.1	DUF6716 putative glycosyltransferase	-
GQ584_RS16635 (GQ584_16445)	neuC	3465203..3466378 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
GQ584_RS16640 (GQ584_16450)	-	3466375..3467630 (-)	1256	Protein_3277	cytidylyltransferase domain-containing protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=357137 GQ584_RS16620 WP_001161835.1 3461488..3462693(+) (kpsS) [Escherichia coli NC101]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=357137 GQ584_RS16620 WP_001161835.1 3461488..3462693(+) (kpsS) [Escherichia coli NC101]
ATGCAAGGTAATGCATTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387