Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   A7X85_RS34195 Genome accession   NZ_CP047019
Coordinates   7602446..7603225 (-) Length   259 a.a.
NCBI ID   WP_055724116.1    Uniprot ID   A0ABW9HNX7
Organism   Streptomyces sp. ST1015     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 7597446..7608225
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7X85_RS34185 (A7X85_34360) - 7599375..7600037 (+) 663 WP_055724752.1 GNAT family N-acetyltransferase -
  A7X85_RS34190 (A7X85_34365) - 7600306..7602279 (+) 1974 WP_055724117.1 ATP-dependent DNA helicase -
  A7X85_RS34195 (A7X85_34370) dinR/lexA 7602446..7603225 (-) 780 WP_055724116.1 transcriptional repressor LexA Regulator
  A7X85_RS34200 (A7X85_34375) nrdR 7603769..7604314 (+) 546 WP_055724115.1 transcriptional regulator NrdR -
  A7X85_RS34205 (A7X85_34380) - 7604485..7607382 (+) 2898 WP_112474066.1 vitamin B12-dependent ribonucleotide reductase -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 28008.72 Da        Isoelectric Point: 7.0665

>NTDB_id=356979 A7X85_RS34195 WP_055724116.1 7602446..7603225(-) (dinR/lexA) [Streptomyces sp. ST1015]
MTTTADSATITAQDRSQGRLDPVHAMNEATSPEGHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSVSVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=356979 A7X85_RS34195 WP_055724116.1 7602446..7603225(-) (dinR/lexA) [Streptomyces sp. ST1015]
GTGACCACCACCGCAGACAGTGCCACCATCACCGCCCAGGACCGCTCCCAGGGCCGGCTCGACCCGGTGCACGCGATGAA
CGAAGCCACCAGTCCCGAGGGGCACAAGCGCTCCCTGCCGGGCCGACCTCCAGGCATCCGGGCGGACAGCTCGGGCCTGA
CCGACCGGCAGCGGCGGGTGATCGAGGTCATCAGGGATTCCGTGCAGCGGCGCGGCTACCCACCGTCCATGCGGGAGATC
GGCCAGGCCGTCGGCCTGTCCAGCACGTCCTCGGTGGCGCACCAGCTGATGGCCCTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGCCCGCGCGCGTACGAGGTGCGCGGCTCCGACCAGTCGGTCTCCGTGCAGCCGACGGACACCGCGGGCA
AGCCCGCCGCGTCGTACGTCCCGCTGGTCGGCCGGATCGCCGCCGGTGGCCCGATCCTCGCGGAGGAGTCCGTCGAGGAC
GTCTTCCCGCTGCCCCGTCAGCTCGTGGGCGACGGTGAGCTGTTCGTGCTGAAGGTCGTCGGCGACTCGATGATCGAGGC
CGCGATCTGTGACGGCGACTGGGTGACCGTCCGGCGCCAGCCCGTCGCCGAGAACGGCGACATCGTCGCCGCGATGCTGG
ACGGGGAGGCGACGGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTTCCGCACAACGCCGCGTACGAGCCG
ATCCCCGGTGACGACGCGACGATCCTCGGCAAGGTGGTGGCCGTACTGCGCCGTGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(141-253)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.445

81.467

0.378