Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   A7X85_RS30475 Genome accession   NZ_CP047019
Coordinates   6738668..6739642 (+) Length   324 a.a.
NCBI ID   WP_109361286.1    Uniprot ID   -
Organism   Streptomyces sp. ST1015     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 6733668..6744642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7X85_RS30460 (A7X85_30615) - 6734050..6735690 (+) 1641 WP_112472827.1 ABC transporter substrate-binding protein -
  A7X85_RS30465 (A7X85_30620) - 6735697..6736620 (+) 924 WP_112472826.1 ABC transporter permease -
  A7X85_RS30470 (A7X85_30625) - 6736613..6737581 (+) 969 WP_109361287.1 ABC transporter permease -
  A7X85_RS30475 (A7X85_30630) amiE 6738668..6739642 (+) 975 WP_109361286.1 ABC transporter ATP-binding protein Regulator
  A7X85_RS30480 (A7X85_30635) - 6739635..6740696 (+) 1062 WP_112476550.1 ABC transporter ATP-binding protein -
  A7X85_RS30485 (A7X85_30640) - 6740855..6742993 (-) 2139 WP_112476551.1 S9 family peptidase -
  A7X85_RS30490 (A7X85_30645) - 6743178..6743372 (+) 195 WP_010350549.1 hypothetical protein -
  A7X85_RS30495 (A7X85_30650) mshB 6743462..6744328 (+) 867 WP_112476552.1 N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase -

Sequence

Protein


Download         Length: 324 a.a.        Molecular weight: 35656.29 Da        Isoelectric Point: 6.0998

>NTDB_id=356965 A7X85_RS30475 WP_109361286.1 6738668..6739642(+) (amiE) [Streptomyces sp. ST1015]
MLLEVRDLHVEFRTRDGVAKAVNGVSYGVEAGETLAVLGESGSGKSVTAQAIMGILDMPPGRISGGEILFQGQDLLTLKE
EERRKIRGAQMAMIFQDALSSLNPVLTVGDQLGEMFEVHRGMSRKDARAKAVELMDRVRIPAAKERVRQYPHQFSGGMRQ
RIMIAMAMALEPALIIADEPTTALDVTVQAQVMDLLAELQREFNMGLILITHDLGVVADVADRIAVMYAGRIVEQAPVHD
IYKAPAHPYTRGLLDSIPRLDQKGQELYAIKGLPPNLMNIPTGCAFNPRCPMAQDICRTDVPPLYDAGEHRTSACHFWRE
CLNG

Nucleotide


Download         Length: 975 bp        

>NTDB_id=356965 A7X85_RS30475 WP_109361286.1 6738668..6739642(+) (amiE) [Streptomyces sp. ST1015]
ATGTTGCTCGAAGTGCGTGATCTGCATGTGGAGTTCCGTACGCGGGACGGGGTCGCCAAGGCCGTCAACGGGGTTTCCTA
CGGGGTCGAGGCCGGGGAGACGCTGGCCGTGCTGGGGGAGTCGGGGTCGGGGAAATCCGTCACCGCTCAGGCGATCATGG
GGATTCTGGACATGCCGCCGGGACGGATCAGCGGGGGCGAGATCCTGTTCCAGGGGCAGGATCTGCTGACGCTGAAAGAG
GAGGAGCGGCGGAAGATCCGGGGCGCGCAGATGGCGATGATCTTCCAGGACGCGCTGTCCTCGCTGAATCCCGTGCTGAC
CGTGGGGGATCAGCTGGGGGAGATGTTCGAGGTGCACCGGGGAATGTCCCGGAAAGACGCTCGCGCCAAGGCGGTCGAGC
TCATGGACCGCGTGCGGATTCCGGCCGCCAAGGAACGTGTACGGCAGTATCCCCACCAGTTCTCCGGCGGCATGCGCCAA
CGCATCATGATCGCCATGGCGATGGCCCTCGAACCCGCCCTGATCATCGCCGACGAACCCACCACCGCCCTCGACGTCAC
CGTCCAGGCCCAGGTCATGGACCTGCTCGCGGAGTTGCAGCGCGAGTTCAACATGGGCCTCATCCTCATCACCCACGACC
TGGGCGTCGTCGCGGACGTCGCCGACCGGATCGCCGTCATGTACGCGGGCCGGATCGTCGAGCAGGCACCGGTGCACGAC
ATCTACAAAGCACCGGCTCATCCCTATACACGCGGACTGCTTGATTCCATCCCCCGTCTTGATCAGAAGGGCCAGGAACT
GTACGCGATCAAGGGATTGCCGCCGAACTTGATGAACATCCCTACGGGTTGCGCGTTCAACCCTCGCTGCCCGATGGCTC
AAGACATCTGCCGGACGGATGTACCGCCCCTGTACGACGCCGGCGAACACCGCACCAGTGCCTGCCACTTCTGGAGGGAG
TGCCTCAATGGTTGA

Domains

Predicted by InterProScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(233-297)

ABC transporter (ABC_tran)

(23-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

47.059

99.691

0.469
  amiE Streptococcus thermophilus LMG 18311

46.13

99.691

0.46
  amiE Streptococcus thermophilus LMD-9

46.13

99.691

0.46
  oppD Streptococcus mutans UA159

47.452

96.914

0.46