Detailed information NTG0356955

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: Psal099_RS19295
• Genome accession: NZ_CP039060
• Coordinates: 2941654..2942607 (+)
• Length: 317 a.a.
• NCBI ID: WP_069971666.1
• Uniprot ID: -
• Organism: Piscirickettsia salmonis strain Psal-099
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2936654..2947607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Psal099_RS14845 (Psal099_02953)	-	2937010..2937366 (+)	357	WP_048875886.1	class I SAM-dependent methyltransferase	-
Psal099_RS14850 (Psal099_02954)	-	2937363..2938766 (-)	1404	WP_053856766.1	IS4 family transposase	-
Psal099_RS14855 (Psal099_02955)	-	2938886..2939446 (-)	561	WP_027243085.1	YbfB/YjiJ family MFS transporter	-
Psal099_RS14860 (Psal099_02956)	-	2939604..2940170 (-)	567	WP_017376236.1	hypothetical protein	-
Psal099_RS19295	pilA	2941654..2942607 (+)	954	WP_069971666.1	signal recognition particle-docking protein FtsY	Machinery gene
Psal099_RS14870 (Psal099_02958)	-	2942871..2943566 (-)	696	WP_027243087.1	hypothetical protein	-
Psal099_RS19300	-	2943607..2943741 (-)	135	Protein_2977	IS3 family transposase	-
Psal099_RS19305 (Psal099_02959)	-	2944024..2944851 (-)	828	WP_335645905.1	IS3 family transposase	-
Psal099_RS19310 (Psal099_02960)	-	2944764..2945051 (-)	288	WP_017376231.1	IS3 family transposase	-
Psal099_RS14885 (Psal099_02961)	-	2945117..2945284 (+)	168	WP_017376230.1	hypothetical protein	-
Psal099_RS14890 (Psal099_02962)	-	2945392..2946501 (+)	1110	WP_017376229.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 34301.26 Da
• Isoelectric Point: 6.3084

>NTDB_id=356955 Psal099_RS19295 WP_069971666.1 2941654..2942607(+) (pilA) [Piscirickettsia salmonis strain Psal-099]
MEKSNTNSNSEKKQGLFARLKSGLSKTRENLASGITTLLIGEKKIDDELLEDLETQLLMADVGIDATTHIITDLTKRLDR
NELTDTQKAMEALKENLSSMLTPCSVPLEIPKSPDPFVILVVGVNGAGKTTTIGKLAKHYQNQGKSVMLAAGDTFRAAAV
EQLQVWGERNDIPVVAQHTGADSASVIFDAYNSAKAHGCDILIADTAGRLHTQSNLMEELKKVKRVLGKVDNTAPHEVLL
VLDSGTGQNAINQAEQFHHAVNVSGIVMTKLDGTAKGGVIFAIAKKMQLPIRYIGVGEKIDDLRPFKSDEFIEALFG

Nucleotide

• Length: 954 bp

>NTDB_id=356955 Psal099_RS19295 WP_069971666.1 2941654..2942607(+) (pilA) [Piscirickettsia salmonis strain Psal-099]
ATTGAAAAAAGCAACACCAATAGTAATAGCGAGAAAAAGCAAGGCTTATTCGCCCGCTTAAAATCTGGTCTCAGTAAGAC
CCGTGAAAATCTGGCCTCAGGTATTACTACACTTTTAATCGGTGAGAAAAAAATCGATGATGAGCTGCTGGAAGATTTAG
AAACTCAGCTACTCATGGCAGACGTCGGCATTGATGCAACGACCCATATCATTACTGACCTAACCAAGCGTCTTGATCGC
AACGAACTTACAGATACCCAAAAAGCGATGGAAGCGCTCAAAGAAAACCTATCCAGCATGCTTACGCCTTGTAGTGTTCC
TCTAGAGATTCCCAAATCACCAGACCCCTTTGTTATTTTAGTCGTCGGCGTCAATGGTGCAGGTAAAACCACAACCATAG
GCAAACTTGCGAAACACTACCAGAACCAAGGCAAAAGCGTCATGCTCGCTGCAGGTGATACCTTCCGCGCTGCCGCGGTT
GAACAATTGCAAGTCTGGGGAGAGCGTAACGATATTCCGGTAGTTGCCCAGCATACCGGTGCTGATAGCGCATCAGTCAT
TTTCGATGCGTATAACTCAGCCAAAGCACATGGTTGTGATATTTTAATTGCCGATACCGCAGGCCGACTGCATACACAAA
GCAACTTAATGGAAGAGCTTAAAAAAGTAAAACGCGTGCTTGGCAAAGTCGACAATACAGCACCGCATGAAGTTTTATTA
GTTCTAGACTCAGGCACCGGGCAAAACGCTATTAACCAAGCTGAGCAGTTTCATCACGCTGTCAATGTATCAGGCATTGT
CATGACTAAACTCGATGGTACTGCTAAAGGTGGGGTCATTTTTGCCATTGCTAAAAAAATGCAACTACCGATCCGTTATA
TCGGTGTCGGTGAAAAAATCGATGATCTACGCCCTTTTAAATCAGATGAATTTATTGAGGCTTTGTTTGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (33-97)

• SRP54-type protein, GTPase domain (SRP54) (116-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.074	97.476	0.517