Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   A7X85_RS16500 Genome accession   NZ_CP047019
Coordinates   3723422..3725155 (+) Length   577 a.a.
NCBI ID   WP_055719201.1    Uniprot ID   A0ABW9HZH4
Organism   Streptomyces sp. ST1015     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3718422..3730155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7X85_RS16470 (A7X85_16540) - 3720421..3720750 (+) 330 WP_109364409.1 hypothetical protein -
  A7X85_RS16490 (A7X85_16560) - 3721320..3721610 (+) 291 WP_112473926.1 YtxH domain-containing protein -
  A7X85_RS16495 (A7X85_16565) - 3721738..3723189 (+) 1452 WP_055719202.1 FGGY family carbohydrate kinase -
  A7X85_RS16500 (A7X85_16570) rcrP 3723422..3725155 (+) 1734 WP_055719201.1 ABC transporter ATP-binding protein Regulator
  A7X85_RS16505 (A7X85_16575) rcrQ 3725155..3727083 (+) 1929 WP_112475998.1 ABC transporter ATP-binding protein Regulator
  A7X85_RS16510 (A7X85_16580) - 3727134..3728382 (-) 1249 Protein_3325 RNA polymerase sigma factor -
  A7X85_RS16515 (A7X85_16585) - 3728498..3729070 (+) 573 WP_162650416.1 hypothetical protein -
  A7X85_RS16520 (A7X85_16590) - 3729067..3730008 (+) 942 WP_112475997.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62655.78 Da        Isoelectric Point: 5.1495

>NTDB_id=356932 A7X85_RS16500 WP_055719201.1 3723422..3725155(+) (rcrP) [Streptomyces sp. ST1015]
MLIRLLRTYLRPYRKPIGLLVLLQLLQTSATLYLPTLNADIIDHGVINGDTGYILTYGALMIGISLAQVVTNIGAVYYGA
RTASALGRDLRGAVFDRVQSFSSREVGQFGAPSLITRTTNDVQQVQMLVLMTFTLMVSAPIMCVGGIVLALGLDVPLSAV
LVAVVPLLGVCVTLIVVKLRPLFRSMQERLDTVNRVLREQITGNRVIRAFVRDAYEEERFRKANTDLTDVSLKAGNLLAL
MFPIVMTVVNLSSIAVVWFGAHRIDDGEMQIGDLTAFLAYLMQIVMAVMMATFMFMMIPRAEVCAERIQEVLETSSSVVP
PSAPVRELRRHGHLELRGAGFRYPGAEEPVLKAVDLVALPGETTAVIGSTGSGKSTLLGLVPRLFDATDGEVLVDGVPVA
DIEPELLAKAVSLVPQKPYLFAGTVATNLRYGNPDATDEELWHALEVAQAREFVERLEGGLNAPIAQGGTNVSGGQRQRL
SIARTLVQRPEIYLFDDSFSALDYATDAALRAALARETAAATVVIVAQRVATIRDADRIVVLDEGRVVGTGTHHELMAEN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=356932 A7X85_RS16500 WP_055719201.1 3723422..3725155(+) (rcrP) [Streptomyces sp. ST1015]
GTGCTCATACGACTTCTGCGGACCTATCTCAGGCCCTATCGAAAACCGATCGGTCTGCTGGTGCTGCTGCAACTGCTCCA
GACCAGCGCGACCCTGTACCTGCCCACGTTGAACGCCGACATCATCGACCACGGCGTCATCAACGGCGACACCGGCTACA
TCCTGACCTACGGCGCTCTGATGATCGGCATCTCGCTGGCGCAGGTCGTGACGAACATCGGTGCCGTGTACTACGGCGCG
CGGACGGCGTCCGCGCTGGGCCGGGACCTGCGCGGGGCGGTGTTCGACCGGGTGCAGTCGTTCTCCTCGCGCGAGGTGGG
CCAGTTCGGTGCCCCGTCGCTGATCACGCGCACGACGAACGACGTGCAGCAGGTCCAGATGCTGGTGCTGATGACGTTCA
CCCTGATGGTGTCCGCGCCGATCATGTGCGTGGGCGGCATCGTGCTGGCGCTCGGTCTTGACGTGCCGCTGTCGGCGGTG
CTGGTGGCCGTCGTCCCGCTGCTGGGCGTCTGCGTGACGCTGATCGTGGTGAAGCTGCGGCCGTTGTTCCGGTCGATGCA
GGAGCGGCTGGACACCGTCAACCGGGTGCTGCGGGAGCAGATCACCGGCAACCGGGTGATCCGCGCGTTCGTGCGGGACG
CGTACGAGGAGGAGCGGTTCCGGAAGGCCAACACGGACCTGACGGACGTATCGCTCAAGGCGGGGAATCTGCTGGCGCTG
ATGTTCCCGATCGTCATGACGGTGGTGAACCTGTCGTCGATCGCGGTGGTCTGGTTCGGGGCCCATCGCATCGACGACGG
CGAGATGCAGATCGGTGATCTGACGGCGTTCCTCGCGTATCTGATGCAGATCGTGATGGCCGTGATGATGGCCACGTTCA
TGTTCATGATGATCCCGCGCGCGGAGGTGTGCGCCGAGCGGATCCAGGAGGTGCTGGAGACGTCGTCGAGCGTGGTTCCG
CCGTCGGCGCCCGTGCGGGAGCTGCGGCGGCACGGGCATCTGGAGCTGCGGGGCGCGGGGTTCCGCTACCCGGGCGCCGA
GGAGCCGGTGCTGAAGGCGGTGGACCTGGTGGCGCTGCCCGGCGAGACGACGGCCGTGATCGGCTCGACGGGCAGCGGCA
AGTCCACGCTCCTGGGGCTCGTGCCCCGGTTGTTCGACGCGACGGACGGCGAGGTCCTGGTGGACGGCGTGCCGGTCGCC
GACATCGAGCCGGAGCTGCTGGCGAAGGCGGTGAGCCTGGTGCCGCAGAAGCCGTACCTGTTCGCGGGGACGGTCGCGAC
GAACCTGCGCTACGGCAACCCGGACGCGACGGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCGCAGGCCAGGGAGTTCG
TGGAGCGGCTCGAGGGCGGGCTGAACGCGCCGATCGCGCAGGGCGGGACGAACGTGTCGGGCGGCCAGCGGCAGCGGCTG
TCCATCGCGCGCACGCTGGTGCAGCGGCCGGAGATCTACCTGTTCGACGACTCGTTCTCCGCGCTCGACTACGCGACGGA
CGCGGCGCTGAGAGCGGCGCTCGCGCGCGAGACGGCGGCGGCGACCGTGGTGATCGTCGCGCAGCGCGTGGCGACCATCC
GCGACGCGGACCGGATCGTCGTCCTGGACGAGGGCCGGGTCGTCGGGACGGGAACCCATCACGAGCTGATGGCGGAGAAC
GAGACGTACCGGGAGATCGTGCTCTCCCAGCTCACGGAAGCGGAGGCTGCCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(19-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.7

94.107

0.383