Detailed information NTG0356927

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: Psal081_RS19125
• Genome accession: NZ_CP039050
• Coordinates: 2931647..2932600 (+)
• Length: 317 a.a.
• NCBI ID: WP_069971666.1
• Uniprot ID: -
• Organism: Piscirickettsia salmonis strain Psal-081
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2926647..2937600

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Psal081_RS14725 (Psal081_02938)	-	2927075..2927431 (+)	357	WP_048875886.1	class I SAM-dependent methyltransferase	-
Psal081_RS14730 (Psal081_02939)	-	2927428..2928831 (-)	1404	WP_053856766.1	IS4 family transposase	-
Psal081_RS14735 (Psal081_02940)	-	2928951..2929511 (-)	561	WP_027243085.1	YbfB/YjiJ family MFS transporter	-
Psal081_RS14740 (Psal081_02941)	-	2929669..2930235 (-)	567	WP_017376236.1	hypothetical protein	-
Psal081_RS19125	pilA	2931647..2932600 (+)	954	WP_069971666.1	signal recognition particle-docking protein FtsY	Machinery gene
Psal081_RS14750 (Psal081_02943)	-	2932864..2933559 (-)	696	WP_027243087.1	hypothetical protein	-
Psal081_RS19130	-	2933600..2933734 (-)	135	Protein_2959	IS3 family transposase	-
Psal081_RS19135 (Psal081_02944)	-	2934017..2934844 (-)	828	WP_335645905.1	IS3 family transposase	-
Psal081_RS19140 (Psal081_02945)	-	2934757..2935044 (-)	288	WP_017376231.1	IS3 family transposase	-
Psal081_RS14765 (Psal081_02946)	-	2935110..2935277 (+)	168	WP_017376230.1	hypothetical protein	-
Psal081_RS14770 (Psal081_02947)	-	2935385..2936494 (+)	1110	WP_017376229.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 34301.26 Da
• Isoelectric Point: 6.3084

>NTDB_id=356927 Psal081_RS19125 WP_069971666.1 2931647..2932600(+) (pilA) [Piscirickettsia salmonis strain Psal-081]
MEKSNTNSNSEKKQGLFARLKSGLSKTRENLASGITTLLIGEKKIDDELLEDLETQLLMADVGIDATTHIITDLTKRLDR
NELTDTQKAMEALKENLSSMLTPCSVPLEIPKSPDPFVILVVGVNGAGKTTTIGKLAKHYQNQGKSVMLAAGDTFRAAAV
EQLQVWGERNDIPVVAQHTGADSASVIFDAYNSAKAHGCDILIADTAGRLHTQSNLMEELKKVKRVLGKVDNTAPHEVLL
VLDSGTGQNAINQAEQFHHAVNVSGIVMTKLDGTAKGGVIFAIAKKMQLPIRYIGVGEKIDDLRPFKSDEFIEALFG

Nucleotide

• Length: 954 bp

>NTDB_id=356927 Psal081_RS19125 WP_069971666.1 2931647..2932600(+) (pilA) [Piscirickettsia salmonis strain Psal-081]
ATTGAAAAAAGCAACACCAATAGTAATAGCGAGAAAAAGCAAGGCTTATTCGCCCGCTTAAAATCTGGTCTCAGTAAGAC
CCGTGAAAATCTGGCCTCAGGTATTACTACACTTTTAATCGGTGAGAAAAAAATCGATGATGAGCTGCTGGAAGATTTAG
AAACTCAGCTACTCATGGCAGACGTCGGCATTGATGCAACGACCCATATCATTACTGACCTAACCAAGCGTCTTGATCGC
AACGAACTTACAGATACCCAAAAAGCGATGGAAGCGCTCAAAGAAAACCTATCCAGCATGCTTACGCCTTGTAGTGTTCC
TCTAGAGATTCCCAAATCACCAGACCCCTTTGTTATTTTAGTCGTCGGCGTCAATGGTGCAGGTAAAACCACAACCATAG
GCAAACTTGCGAAACACTACCAGAACCAAGGCAAAAGCGTCATGCTCGCTGCAGGTGATACCTTCCGCGCTGCCGCGGTT
GAACAATTGCAAGTCTGGGGAGAGCGTAACGATATTCCGGTAGTTGCCCAGCATACCGGTGCTGATAGCGCATCAGTCAT
TTTCGATGCGTATAACTCAGCCAAAGCACATGGTTGTGATATTTTAATTGCCGATACCGCAGGCCGACTGCATACACAAA
GCAACTTAATGGAAGAGCTTAAAAAAGTAAAACGCGTGCTTGGCAAAGTCGACAATACAGCACCGCATGAAGTTTTATTA
GTTCTAGACTCAGGCACCGGGCAAAACGCTATTAACCAAGCTGAGCAGTTTCATCACGCTGTCAATGTATCAGGCATTGT
CATGACTAAACTCGATGGTACTGCTAAAGGTGGGGTCATTTTTGCCATTGCTAAAAAAATGCAACTACCGATCCGTTATA
TCGGTGTCGGTGAAAAAATCGATGATCTACGCCCTTTTAAATCAGATGAATTTATTGAGGCTTTGTTTGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (33-97)

• SRP54-type protein, GTPase domain (SRP54) (116-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.074	97.476	0.517