Detailed information NTG0356892

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GQF95_RS20840
• Genome accession: NZ_CP047010
• Coordinates: 4297582..4298565 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 19-5
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4292582..4303565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQF95_RS20815 (GQF95_20795)	bcsF	4292744..4292935 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
GQF95_RS20820 (GQF95_20800)	bcsG	4292932..4294610 (+)	1679	Protein_4107	cellulose biosynthesis protein BcsG	-
GQF95_RS20825 (GQF95_20805)	ldrD	4294697..4294804 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
GQF95_RS20830 (GQF95_20810)	yhjV	4295280..4296551 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
GQF95_RS20835 (GQF95_20815)	dppF	4296581..4297585 (-)	1005	WP_113402264.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GQF95_RS20840 (GQF95_20820)	amiE	4297582..4298565 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
GQF95_RS20845 (GQF95_20825)	dppC	4298576..4299478 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GQF95_RS20850 (GQF95_20830)	dppB	4299488..4300507 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GQF95_RS26285	-	4300671..4300781 (+)	111	Protein_4114	hypothetical protein	-
GQF95_RS20855 (GQF95_20835)	dppA	4300815..4302422 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=356892 GQF95_RS20840 WP_001196486.1 4297582..4298565(-) (amiE) [Escherichia coli strain 19-5]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=356892 GQF95_RS20840 WP_001196486.1 4297582..4298565(-) (amiE) [Escherichia coli strain 19-5]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404