Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E5093_RS11090 Genome accession   NZ_CP039031
Coordinates   2330553..2330936 (-) Length   127 a.a.
NCBI ID   WP_005179541.1    Uniprot ID   A0A6C0Y077
Organism   Acinetobacter indicus strain yy_1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2325553..2335936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E5093_RS11075 (E5093_11170) - 2327510..2329582 (-) 2073 WP_177155922.1 methyl-accepting chemotaxis protein -
  E5093_RS11080 (E5093_11175) - 2329628..2330164 (-) 537 WP_005179538.1 chemotaxis protein CheW -
  E5093_RS11085 (E5093_11180) - 2330168..2330536 (-) 369 WP_005179539.1 PleD family two-component system response regulator -
  E5093_RS11090 (E5093_11185) pilG 2330553..2330936 (-) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  E5093_RS11095 (E5093_11190) - 2331266..2331859 (+) 594 WP_410487189.1 hypothetical protein -
  E5093_RS11100 (E5093_11195) - 2331914..2333059 (+) 1146 WP_177155924.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14225.27 Da        Isoelectric Point: 4.7066

>NTDB_id=356841 E5093_RS11090 WP_005179541.1 2330553..2330936(-) (pilG) [Acinetobacter indicus strain yy_1]
MDDKLQNLKVMVIDDSKTIRRTAETLLQREGYEVVTAVDGFEALSKIADANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=356841 E5093_RS11090 WP_005179541.1 2330553..2330936(-) (pilG) [Acinetobacter indicus strain yy_1]
ATGGACGATAAACTCCAAAATCTAAAAGTCATGGTGATTGATGATTCAAAAACCATTCGTCGTACAGCTGAAACTTTATT
ACAGCGTGAAGGCTATGAAGTGGTCACTGCCGTCGACGGTTTTGAAGCATTGTCTAAAATTGCCGATGCAAATCCGGATA
TCGTTTTTGTTGACATCATGATGCCACGTCTAGATGGCTATCAAACCTGCGCATTAATTAAAAACTCGCAAAACTACCAG
AATATTCCAGTCATCATGCTGTCCAGTAAAGATGGTCTGTTCGATCAGGCCAAAGGCCGCGTGGTGGGTTCAGATGAATA
TTTAACCAAACCTTTTAGTAAAGATGAGCTTTTAAACGCGATTCGTAATCACGTAAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6C0Y077

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment