Detailed information NTG0356819

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: E5093_RS01155
• Genome accession: NZ_CP039031
• Coordinates: 247831..249186 (-)
• Length: 451 a.a.
• NCBI ID: WP_171525655.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain yy_1
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 242831..254186

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5093_RS01140 (E5093_01145)	lptG	243885..244955 (+)	1071	WP_005181568.1	LPS export ABC transporter permease LptG	-
E5093_RS01145 (E5093_01150)	gpmI	245074..246621 (+)	1548	WP_177155248.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
E5093_RS01150 (E5093_01155)	-	246645..247814 (+)	1170	WP_177155249.1	S41 family peptidase	-
E5093_RS01155 (E5093_01160)	pilR	247831..249186 (-)	1356	WP_171525655.1	sigma-54-dependent transcriptional regulator	Regulator
E5093_RS01160 (E5093_01165)	pilS	249258..250826 (-)	1569	WP_177155250.1	sensor histidine kinase	Regulator
E5093_RS01165 (E5093_01170)	-	250841..251476 (-)	636	WP_005181577.1	response regulator	-
E5093_RS01170 (E5093_01175)	-	251694..252776 (+)	1083	WP_127799456.1	serine hydrolase	-
E5093_RS01175 (E5093_01180)	thrC	252869..254014 (-)	1146	WP_177155251.1	threonine synthase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50611.31 Da
• Isoelectric Point: 6.6716

>NTDB_id=356819 E5093_RS01155 WP_171525655.1 247831..249186(-) (pilR) [Acinetobacter indicus strain yy_1]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAYSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAITLSDDDVIDLPHLQTAPLRKMAPLAEPEADPATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=356819 E5093_RS01155 WP_171525655.1 247831..249186(-) (pilR) [Acinetobacter indicus strain yy_1]
ATGCAAATGACATTGGCGCGCATGGGAATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGGCAGTTGCTGTCCAG
TCATCACTATGATGCTTGCATCACCGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCATATAGTCAGGAAGCAGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTGCCAATTCAGCAACTACGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTGGTGGCCAAT
CTGGTGCATCGCCTCAGTAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGTGCCATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGCGCGGCGCAGGACAAACAGGGCCTGATCCAGTCAGCACACG
GCGGCAGCCTGTTCCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAATTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATCAGCGCCAGCCATCAGGACCTGGAAGC
ATTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGCTGCCACCTCTACGTG
AGCGTGGTCAGGATATTTTACTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTGCGCAATATTATTGAACG
CGCCATAACCTTGAGTGATGACGATGTGATTGATCTGCCACATCTGCAAACTGCACCCTTACGCAAGATGGCACCGCTGG
CCGAGCCAGAAGCTGACCCGGCAACACCGGTTACAGCCGATGCCCTGCCCGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATTGAAAAAGAGATTTTGCTGAATGCGCTGAATCTGACCCATTGGAACCGGACTTTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTGAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-97)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.279	100	0.743
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501