Detailed information NTG0356811

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: E5A72_RS15605
• Genome accession: NZ_CP039025
• Coordinates: 3217260..3217961 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594584.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii ATCC 17978 substr. PMR-High
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3212260..3222961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5A72_RS15570 (E5A72_15570)	kdsB	3212783..3213544 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
E5A72_RS15575 (E5A72_15575)	-	3213556..3214536 (+)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
E5A72_RS15580 (E5A72_15580)	-	3214548..3214889 (+)	342	WP_001183025.1	PilZ domain-containing protein	-
E5A72_RS15585 (E5A72_15585)	-	3214907..3215680 (+)	774	WP_000497298.1	TatD family hydrolase	-
E5A72_RS15590 (E5A72_15590)	-	3215718..3216326 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
E5A72_RS15595 (E5A72_15595)	-	3216336..3216890 (+)	555	WP_000841375.1	type II secretion system protein	-
E5A72_RS15600 (E5A72_15600)	xcpV	3216880..3217260 (+)	381	WP_000836915.1	type II secretion system minor pseudopilin GspI	Machinery gene
E5A72_RS15605 (E5A72_15605)	xcpW	3217260..3217961 (+)	702	WP_000594584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
E5A72_RS15610 (E5A72_15610)	gspK	3217961..3218920 (+)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
E5A72_RS15615 (E5A72_15615)	-	3219150..3219746 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
E5A72_RS15620 (E5A72_15620)	ung	3219797..3220510 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
E5A72_RS15625 (E5A72_15625)	-	3220507..3221631 (+)	1125	WP_000982062.1	enoyl-CoA hydratase/isomerase family protein	-
E5A72_RS15630 (E5A72_15630)	tadA	3221638..3222141 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
E5A72_RS15635 (E5A72_15635)	-	3222211..3222654 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26622.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=356811 E5A72_RS15605 WP_000594584.1 3217260..3217961(+) (xcpW) [Acinetobacter baumannii ATCC 17978 substr. PMR-High]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=356811 E5A72_RS15605 WP_000594584.1 3217260..3217961(+) (xcpW) [Acinetobacter baumannii ATCC 17978 substr. PMR-High]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996