Detailed information NTG0356788

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GQF94_RS13690
• Genome accession: NZ_CP047002
• Coordinates: 2837409..2838392 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain J-8
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2832409..2843392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQF94_RS13665 (GQF94_13650)	-	2833558..2833665 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GQF94_RS13670 (GQF94_13655)	-	2834041..2834148 (-)	108	WP_000170747.1	type I toxin-antitoxin system toxin Ldr family protein	-
GQF94_RS13675 (GQF94_13660)	-	2834524..2834631 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GQF94_RS13680 (GQF94_13665)	yhjV	2835107..2836378 (+)	1272	WP_064055624.1	aromatic amino acid transport family protein	-
GQF94_RS13685 (GQF94_13670)	dppF	2836408..2837412 (-)	1005	WP_000107024.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GQF94_RS13690 (GQF94_13675)	amiE	2837409..2838392 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
GQF94_RS13695 (GQF94_13680)	dppC	2838403..2839305 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GQF94_RS13700 (GQF94_13685)	dppB	2839315..2840334 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GQF94_RS13705 (GQF94_13690)	dppA	2840485..2842092 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=356788 GQF94_RS13690 WP_001196486.1 2837409..2838392(-) (amiE) [Escherichia coli strain J-8]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=356788 GQF94_RS13690 WP_001196486.1 2837409..2838392(-) (amiE) [Escherichia coli strain J-8]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404