Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | LL3_RS08530 | Genome accession | NC_017190 |
| Coordinates | 1665231..1665593 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens LL3 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1660231..1670593
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL3_RS08500 (LL3_01787) | flgD | 1661146..1661577 (+) | 432 | WP_013352262.1 | flagellar hook assembly protein FlgD | - |
| LL3_RS08505 (LL3_01788) | flgG | 1661602..1662378 (+) | 777 | WP_013352263.1 | flagellar basal body rod protein FlgG | - |
| LL3_RS08510 (LL3_01789) | - | 1662418..1662633 (+) | 216 | WP_013352264.1 | flagellar FlbD family protein | - |
| LL3_RS08515 (LL3_01790) | fliL | 1662630..1663049 (+) | 420 | WP_013352265.1 | flagellar basal body-associated protein FliL | - |
| LL3_RS08520 (LL3_01791) | fliM | 1663083..1664081 (+) | 999 | WP_013352266.1 | flagellar motor switch protein FliM | - |
| LL3_RS08525 (LL3_01792) | fliY | 1664071..1665204 (+) | 1134 | WP_013352267.1 | flagellar motor switch phosphatase FliY | - |
| LL3_RS08530 (LL3_01793) | pilH | 1665231..1665593 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| LL3_RS08535 (LL3_01794) | fliZ | 1665608..1666261 (+) | 654 | WP_013352268.1 | flagella biosynthesis regulatory protein FliZ | - |
| LL3_RS08540 (LL3_01795) | fliP | 1666254..1666919 (+) | 666 | WP_013352269.1 | flagellar type III secretion system pore protein FliP | - |
| LL3_RS08545 (LL3_01796) | fliQ | 1666934..1667203 (+) | 270 | WP_013352270.1 | flagellar biosynthesis protein FliQ | - |
| LL3_RS08550 (LL3_01797) | fliR | 1667210..1667989 (+) | 780 | WP_013352271.1 | flagellar biosynthetic protein FliR | - |
| LL3_RS08555 (LL3_01798) | flhB | 1667989..1669068 (+) | 1080 | WP_013352272.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=35677 LL3_RS08530 WP_003154238.1 1665231..1665593(+) (pilH) [Bacillus amyloliquefaciens LL3]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=35677 LL3_RS08530 WP_003154238.1 1665231..1665593(+) (pilH) [Bacillus amyloliquefaciens LL3]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTCAAAGAGCATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTCAAAGAGCATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |