Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | RI02_RS04990 | Genome accession | NZ_CP039020 |
| Coordinates | 995823..996401 (+) | Length | 192 a.a. |
| NCBI ID | WP_017366958.1 | Uniprot ID | A0A5D4P9G2 |
| Organism | Bacillus altitudinis strain BA06 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 990823..1001401
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RI02_RS04970 (RI02_05035) | - | 991316..992677 (-) | 1362 | WP_370539267.1 | globin-coupled sensor protein | - |
| RI02_RS04975 (RI02_05040) | - | 992703..994235 (-) | 1533 | WP_017366956.1 | FAD-dependent oxidoreductase | - |
| RI02_RS04980 (RI02_05045) | - | 994378..995238 (+) | 861 | WP_017366957.1 | SDR family oxidoreductase | - |
| RI02_RS04985 (RI02_05050) | - | 995297..995533 (-) | 237 | WP_008348804.1 | IDEAL domain-containing protein | - |
| RI02_RS04990 (RI02_05055) | comK | 995823..996401 (+) | 579 | WP_017366958.1 | competence protein ComK | Regulator |
| RI02_RS04995 (RI02_05060) | - | 996545..997651 (+) | 1107 | WP_017366959.1 | alanine racemase | - |
| RI02_RS05000 (RI02_05065) | - | 997953..998435 (+) | 483 | WP_017366960.1 | hypothetical protein | - |
| RI02_RS05005 (RI02_05070) | - | 998466..999905 (-) | 1440 | WP_017366961.1 | PLP-dependent aminotransferase family protein | - |
| RI02_RS05010 (RI02_05075) | - | 1000049..1001218 (+) | 1170 | WP_017366962.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22348.40 Da Isoelectric Point: 8.7996
>NTDB_id=356702 RI02_RS04990 WP_017366958.1 995823..996401(+) (comK) [Bacillus altitudinis strain BA06]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=356702 RI02_RS04990 WP_017366958.1 995823..996401(+) (comK) [Bacillus altitudinis strain BA06]
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGAGTATATTCAAAAGTGATCGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATTTCCCACAAGCCTCCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTACCTCCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGAGTATATTCAAAAGTGATCGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATTTCCCACAAGCCTCCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTACCTCCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.458 |
100 |
0.615 |