Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RI02_RS04010 Genome accession   NZ_CP039020
Coordinates   815174..815965 (+) Length   263 a.a.
NCBI ID   WP_017358838.1    Uniprot ID   A0A5K1NDE0
Organism   Bacillus altitudinis strain BA06     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 810174..820965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RI02_RS03975 (RI02_04020) - 810263..810811 (+) 549 WP_008341670.1 thioredoxin family protein -
  RI02_RS03980 (RI02_04025) - 811150..811617 (+) 468 WP_007496690.1 thiol-disulfide oxidoreductase DCC family protein -
  RI02_RS03985 (RI02_04030) - 811653..812909 (-) 1257 WP_008341668.1 transcriptional regulator -
  RI02_RS03990 (RI02_04035) - 813180..813767 (+) 588 WP_034646352.1 nitroreductase family protein -
  RI02_RS03995 (RI02_04040) - 813802..813957 (-) 156 WP_008341997.1 YfhD family protein -
  RI02_RS04000 (RI02_04045) - 814019..814129 (-) 111 WP_017358836.1 YfhE family protein -
  RI02_RS04005 (RI02_04050) - 814182..815078 (-) 897 WP_017366870.1 TIGR01777 family oxidoreductase -
  RI02_RS04010 (RI02_04055) recX 815174..815965 (+) 792 WP_017358838.1 recombination regulator RecX Regulator
  RI02_RS04015 (RI02_04060) - 815969..816283 (+) 315 WP_007496702.1 YfhH family protein -
  RI02_RS04020 (RI02_04065) - 816346..816519 (-) 174 WP_003217811.1 YpzG family protein -
  RI02_RS04025 (RI02_04070) - 816545..816694 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  RI02_RS04030 (RI02_04075) - 816811..817083 (+) 273 WP_017366871.1 YfhJ family protein -
  RI02_RS04035 (RI02_04080) - 817384..818367 (+) 984 WP_017366872.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30630.03 Da        Isoelectric Point: 7.0789

>NTDB_id=356698 RI02_RS04010 WP_017358838.1 815174..815965(+) (recX) [Bacillus altitudinis strain BA06]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=356698 RI02_RS04010 WP_017358838.1 815174..815965(+) (recX) [Bacillus altitudinis strain BA06]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAATACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGATGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCATATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AATTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCAAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTGAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATTATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAGAAAAAAATGAAA
GTAAAGCAATTCCTTTACCGAAAAGGTTTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NDE0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635

Multiple sequence alignment