Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | GQO96_RS08080 | Genome accession | NZ_CP046898 |
| Coordinates | 1686682..1687788 (+) | Length | 368 a.a. |
| NCBI ID | WP_001187345.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain A1429 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1681682..1692788
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQO96_RS08040 (GQO96_08000) | - | 1681757..1682080 (+) | 324 | WP_000121846.1 | hypothetical protein | - |
| GQO96_RS08045 (GQO96_08005) | grxD | 1682127..1682468 (-) | 342 | WP_032031023.1 | Grx4 family monothiol glutaredoxin | - |
| GQO96_RS08050 (GQO96_08010) | - | 1682696..1683904 (+) | 1209 | WP_000129946.1 | aspartate aminotransferase family protein | - |
| GQO96_RS08055 (GQO96_08015) | - | 1683955..1684386 (-) | 432 | WP_000156920.1 | CBS domain-containing protein | - |
| GQO96_RS08060 (GQO96_08020) | - | 1684527..1684901 (-) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| GQO96_RS08065 (GQO96_08025) | - | 1685339..1685572 (-) | 234 | WP_000616034.1 | hypothetical protein | - |
| GQO96_RS08070 (GQO96_08030) | - | 1685788..1686147 (+) | 360 | WP_000185571.1 | hypothetical protein | - |
| GQO96_RS08075 (GQO96_08035) | - | 1686248..1686574 (+) | 327 | WP_000955083.1 | hypothetical protein | - |
| GQO96_RS08080 (GQO96_08040) | pilA | 1686682..1687788 (+) | 1107 | WP_001187345.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| GQO96_RS08085 (GQO96_08045) | - | 1687978..1688574 (+) | 597 | WP_176673663.1 | nitroreductase family protein | - |
| GQO96_RS08090 (GQO96_08050) | - | 1688799..1689470 (+) | 672 | WP_104130882.1 | DUF2057 domain-containing protein | - |
| GQO96_RS08095 (GQO96_08055) | - | 1689543..1690067 (+) | 525 | WP_002157656.1 | GNAT family N-acetyltransferase | - |
| GQO96_RS08100 (GQO96_08060) | - | 1690080..1690379 (-) | 300 | WP_104130881.1 | cyd operon YbgE family protein | - |
| GQO96_RS08105 (GQO96_08065) | cydX | 1690380..1690481 (-) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| GQO96_RS08110 (GQO96_08070) | cydB | 1690495..1691640 (-) | 1146 | WP_176673664.1 | cytochrome d ubiquinol oxidase subunit II | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39935.72 Da Isoelectric Point: 4.9872
>NTDB_id=356582 GQO96_RS08080 WP_001187345.1 1686682..1687788(+) (pilA) [Acinetobacter baumannii strain A1429]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEASPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEASPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=356582 GQO96_RS08080 WP_001187345.1 1686682..1687788(+) (pilA) [Acinetobacter baumannii strain A1429]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTGGTCGAGGCTTCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCTTTGCAAGAAGAGTTGGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACGACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGACAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTTGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGCGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTGGTCGAGGCTTCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCTTTGCAAGAAGAGTTGGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACGACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGACAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTTGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGCGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.038 |
86.685 |
0.451 |