Detailed information NTG0356259

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: GPY41_RS19390
• Genome accession: NZ_CP046835
• Coordinates: 2436126..2438948 (+)
• Length: 940 a.a.
• NCBI ID: WP_026050227.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 07-2444
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2431126..2443948

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY41_RS19370	csrD	2431289..2433286 (-)	1998	WP_026130604.1	RNase E specificity factor CsrD	-
GPY41_RS19375	ssb	2433439..2433978 (-)	540	WP_011079389.1	single-stranded DNA-binding protein	Machinery gene
GPY41_RS19380	qstR	2434278..2434925 (+)	648	WP_017420064.1	response regulator transcription factor	Regulator
GPY41_RS19385	galU	2435111..2435983 (+)	873	WP_017420065.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
GPY41_RS19390	uvrA	2436126..2438948 (+)	2823	WP_026050227.1	excinuclease ABC subunit UvrA	Machinery gene
GPY41_RS19395	-	2439015..2440778 (+)	1764	WP_158123872.1	PglL family O-oligosaccharyltransferase	-
GPY41_RS19400	-	2440843..2441964 (-)	1122	WP_158123873.1	alanine--glyoxylate aminotransferase family protein	-
GPY41_RS19405	lysC	2442479..2443828 (+)	1350	WP_080536734.1	lysine-sensitive aspartokinase 3	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 104003.36 Da
• Isoelectric Point: 6.4491

>NTDB_id=356259 GPY41_RS19390 WP_026050227.1 2436126..2438948(+) (uvrA) [Vibrio vulnificus strain 07-2444]
MDKIEVRGARTHNLKNVNLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEHQVPLAAQTISQMVDKVLELPEGAKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPTLELHKKHTIEVVVDRFKVRSDLQQRLAESFETALELSGGIAVIAPMEGD
GEESVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPDRVIQDANLSLAQGAIRGWDQKNYYYFQML
TSLAEHYDFDLHVPFNSLSKRIQEVILKGSGRTEIEFKYINDRGDIRLKRHPFEGILNTLERRYRDTESNSVREELVKYI
STKPCASCGGTRLRLEARNVFINDTTLPQIVELSIADALTFFATLKLDGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGQVVAEGTMAEILANPDSLTGQYLSGAKQIIVPTQRTPRDKNKTVELIGASGNNLKDVNLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVHYKGKSIDEVLEMTVEDARDFFD
PVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=356259 GPY41_RS19390 WP_026050227.1 2436126..2438948(+) (uvrA) [Vibrio vulnificus strain 07-2444]
ATGGACAAGATAGAAGTTCGCGGAGCACGTACCCATAATCTCAAAAATGTTAATCTCACTATCCCACGAGATAAGTTGAT
CGTCATTACTGGCTTATCGGGTTCAGGGAAATCTTCTTTGGCCTTTGATACCCTTTACGCTGAAGGTCAACGACGTTATG
TAGAATCCCTGTCAGCCTACGCTCGCCAGTTTCTCTCTTTGATGGAAAAGCCCGATGTTGACCATATTGAAGGCCTCTCG
CCAGCGATTTCTATCGAGCAAAAATCCACCTCACACAACCCGCGTTCAACCGTAGGAACCATCACAGAAGTGTATGACTA
CCTTCGCCTACTGTATGCCCGCGTTGGTGAACCTCGCTGTCCTGAACATCAAGTCCCTTTAGCCGCTCAAACCATTAGTC
AAATGGTCGACAAAGTTCTGGAGCTGCCTGAAGGTGCCAAAATGATGTTGCTCGCCCCCATCGTAAAAGAGCGCAAAGGC
GAACACGTTAAAACATTAGAGAACCTTGCTGCTCAAGGTTTTATCCGTGCACGTATTGACGGAGAGACCTGTGACCTCAC
CGATCCACCAACGCTAGAGTTACACAAAAAGCACACCATTGAAGTGGTGGTTGACCGCTTTAAAGTACGTAGCGATTTAC
AACAAAGACTCGCAGAGTCCTTTGAAACGGCACTGGAACTCTCAGGCGGCATCGCTGTGATTGCCCCTATGGAGGGTGAC
GGTGAAGAGAGCGTTTTTTCCGCCAATTTTGCGTGTCCCCACTGTGGTTATAGTATGCAAGAGCTTGAGCCACGTTTGTT
CTCGTTCAATAACCCAGCCGGTGCATGTGGTACTTGTGATGGCCTCGGGGTACAACAATATTTTGACCCTGACCGAGTGA
TTCAAGATGCCAATTTAAGTCTTGCGCAAGGGGCGATTCGTGGTTGGGATCAGAAAAACTATTACTATTTCCAAATGCTC
ACATCGCTGGCTGAGCATTATGATTTCGATTTACACGTCCCTTTTAATTCGCTTTCAAAACGCATCCAAGAAGTGATCTT
AAAAGGCTCAGGGCGCACTGAAATCGAATTTAAGTACATCAACGATCGAGGCGACATTCGTCTAAAACGTCATCCATTTG
AAGGCATTCTCAATACACTCGAACGCCGTTATCGCGACACAGAATCTAACTCGGTACGAGAGGAGTTAGTAAAATATATC
TCCACCAAACCTTGCGCCAGTTGTGGCGGAACACGTCTGCGCCTAGAAGCTCGCAATGTGTTTATTAATGACACGACATT
GCCGCAAATCGTCGAGTTGAGTATCGCTGATGCATTGACCTTTTTCGCCACCTTAAAACTTGACGGGCAGCGAGCTCAAA
TTGCTGAGAAGGTCATGAAAGAGATCAACGATCGACTGCAGTTTTTAGTCAATGTTGGCCTCAATTATTTGAACTTGTCT
CGCAGCGCTGAAACCTTGTCTGGTGGCGAAGCACAACGCATTCGTCTGGCTAGTCAGATCGGTGCCGGTTTGGTTGGTGT
GATGTATGTGCTCGATGAACCATCAATAGGCCTTCACCAGCGTGACAATGAGCGCTTACTCAAAACACTGACGCACTTAC
GCGATCTCGGCAATACCGTATTAGTCGTAGAGCATGATGAAGATGCGATTCGTTGTGCCGACCATGTGATTGACATTGGC
CCTGGTGCTGGCGTACATGGTGGCCAAGTGGTTGCCGAAGGAACAATGGCCGAGATTCTCGCCAATCCAGATTCCTTGAC
CGGACAATACTTAAGCGGTGCCAAGCAGATTATTGTGCCGACCCAACGCACACCAAGAGATAAGAACAAAACGGTTGAAC
TCATTGGAGCCAGTGGCAACAACCTTAAAGACGTCAATCTTTCAGTGCCTGTTGGGCTATTCAGTTGTATCACCGGGGTT
TCTGGTTCAGGTAAATCAACACTGATTAACGACACCTTCTTCAAAATTGCGCATACTCAACTCAATGGAGCGACCACTGC
TCAACCAGCGCCTTATAAGTCTATTAAAGGCTTAGAGCATTTTGATAAGGTCATCGATATCGACCAGAGCCCGATAGGTC
GCACACCGCGTTCGAATCCAGCGACCTATACGGGGATTTTCACTCCGATTCGAGAGCTGTTCTCCGGCACCCAAGAGTCT
CGTTCACGTGGCTATAAGCCAGGGCGTTTCAGCTTTAACGTTCGTGGTGGCCGCTGTGAAGCTTGCCAAGGTGATGGTGT
TATCAAGGTTGAAATGCATTTCCTACCCGATGTGTACGTGCCTTGTGATGTGTGTAAGGGCAAGCGCTACAACCGAGAAA
CGTTAGAAGTCCACTATAAAGGGAAGAGCATTGATGAAGTTCTGGAAATGACGGTGGAAGATGCTCGAGACTTTTTCGAC
CCAGTTCCCGTCATTGCGCGCAAGTTGCAAACCTTAATGGATGTTGGTCTTTCTTATATCCGTTTAGGTCAAGCGGCGAC
CACCCTCTCTGGCGGTGAAGCACAGCGGGTGAAACTGGCCCGTGAGTTGTCCAAACGCGATACGGGAAAAACCCTTTATA
TTTTGGATGAACCAACGACGGGCCTACACTTCCACGATATCCAGCAACTTTTGACCGTATTGCATCGCTTGCGCGATCAT
GGCAACACCGTTGTCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCCGACTGGATCATCGACTTAGGTCCAGAAGG
CGGCCAAGGTGGAGGGGAAATCATTGCTCAAGGAACACCTGAAGATGTGGCGCAGATCGAAGGTTCGCATACCGCACGCT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-396)

• UvrA interaction domain (UvrA_inter) (130-236)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.962	100	0.581
uvrA	Streptococcus pneumoniae TIGR4	57.962	100	0.581
uvrA	Streptococcus pneumoniae D39	57.962	100	0.581