Detailed information NTG0356209

Bioinformatically predicted

Overview

• Name: tfoS
• Type: Regulator
• Locus tag: GPY41_RS08950
• Genome accession: NZ_CP046835
• Coordinates: 330507..333848 (+)
• Length: 1113 a.a.
• NCBI ID: WP_407047679.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 07-2444
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 325507..338848

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY41_RS08925	sucC	325634..326800 (+)	1167	WP_011078272.1	ADP-forming succinate--CoA ligase subunit beta	-
GPY41_RS08930	sucD	326800..327672 (+)	873	WP_017421011.1	succinate--CoA ligase subunit alpha	-
GPY41_RS08935	znuB	327754..328539 (-)	786	WP_017421010.1	zinc ABC transporter permease subunit ZnuB	-
GPY41_RS08940	znuC	328532..329317 (-)	786	WP_017421009.1	zinc ABC transporter ATP-binding protein ZnuC	-
GPY41_RS08945	znuA	329399..330273 (+)	875	Protein_299	zinc ABC transporter substrate-binding protein ZnuA	-
GPY41_RS08950	tfoS	330507..333848 (+)	3342	WP_407047679.1	helix-turn-helix domain-containing protein	Regulator
GPY41_RS08955	-	334641..334868 (+)	228	WP_011149798.1	FeoA family protein	-
GPY41_RS08960	feoB	334868..337144 (+)	2277	WP_158123094.1	Fe(2+) transporter permease subunit FeoB	-
GPY41_RS08965	-	337141..337371 (+)	231	WP_011149800.1	FeoC-like transcriptional regulator	-
GPY41_RS08970	-	337480..337908 (-)	429	WP_026130426.1	HIT domain-containing protein	-

Sequence

Protein

• Length: 1113 a.a.
• Molecular weight: 124226.16 Da
• Isoelectric Point: 5.2664

>NTDB_id=356209 GPY41_RS08950 WP_407047679.1 330507..333848(+) (tfoS) [Vibrio vulnificus strain 07-2444]
MDGNSAIFYPLPGQEQGTFVAAKNLFVGGDGGLWIHDVHGKVQYFDGNTLLPKRGSLLEFPSEQVAFHQGSFWTFVANEV
FQTYPNQKRQLAFSLNPGAEIRKIGSSDGHIWVSDGINFYDYDIESKELKTYSLLSLYQNNQSSYVYINDAKRVLSKWVL
GTTSGAYLSQGEQFTHIKASAKHFVAKLYFSPTRRELLVGTLNGAALIDILKPTQKNIMIGESHVLSMTETNQEYWIGTE
HGLYSYSFLNGQVAKVKAAGAQDVSPDNRKIYSLVNDEQGGIWVATNSGILYYSLFGRKFERLNNITEEKASRFNGNITK
IVYASDETIWFKDANNLYRAIGVNKQYSRVRLPIKVNDFALEDGNIWIASEQGLYIYDTNQYKLRSFDLPSYLKGKEIDF
VSVSPQGKVWISSGYRLAAIGVADGRFQDYGDRWIASQNLPARILGLEVDQKVPLIVRTDHGAYVLENDKIRFERNTQSF
GESVDIAEAKDGSLWFAGTHGIYRKDPTEKTLGELALPQENVKPICLITDASGIWMVSSIGLSFYNFDGALRKHFGSRSG
IMSNEFVEGSCAASFGEAQSGSVLVLGSKHGLIFADRDDLMVSKLPEPRVVISQVRIDEQVANVGQKEWQLPELAYGSAI
SFGLGVMPNAYGETLYYRLNQEHWQTTEAGQVSFEHLAAGDYLLSVKTSLVAGDSVQVRFTVLHPWYQTTMAMAIFVLLI
VALGGLVVFWRSRYVSVQNRELTALVALKTNQLRHQSRVLLTSNQQLRKQIQVRNLLVDNVARSLRQSVDALLSKPSVEP
ASEYQEHQMRIAMLLEELKSSPSDGTDGYLQNFNVSHIIQSVVDVWEDELSKIGVQVHISSESDDYRVAVGQFNLDVIFN
SVFASVLKRAYRGQMLDIVIREQNDFVEVSFIDFGQPFSTNTDAEDSAGVEPAKVDTAIEKLPALVEQSGGRLSLFSSAE
RNKIEILWPKAVESLINDEEPSVFVDSVDPSPATEVSSEGAPSPEQLWLAKVEAMVAEHYTNPEFGTAMAAKMLYVSERS
LQRRFKSASSRTFTDYLTEVRLEKACESLLAGEKVVDVAFASGFNDPSYFSQRFKLYFGVPPSKFASDALESE

Nucleotide

• Length: 3342 bp

>NTDB_id=356209 GPY41_RS08950 WP_407047679.1 330507..333848(+) (tfoS) [Vibrio vulnificus strain 07-2444]
TTGGACGGAAACTCTGCCATATTTTACCCACTGCCTGGACAGGAGCAGGGAACCTTTGTTGCCGCTAAAAATCTCTTTGT
TGGCGGCGATGGTGGTTTATGGATACATGACGTGCACGGCAAAGTGCAATATTTCGATGGTAATACCTTGTTGCCGAAAC
GTGGCAGCCTTCTAGAGTTTCCTTCCGAGCAAGTGGCCTTTCACCAAGGCAGTTTTTGGACTTTTGTCGCGAACGAAGTC
TTCCAAACGTACCCCAATCAGAAACGTCAGTTAGCGTTTAGCTTAAATCCGGGAGCAGAAATCAGAAAAATTGGCAGCTC
AGATGGTCACATTTGGGTGAGTGATGGCATCAATTTTTATGACTACGATATTGAATCAAAAGAATTAAAAACTTATTCCT
TACTCTCGTTGTATCAAAACAATCAGAGTAGTTACGTCTACATCAATGATGCAAAGAGGGTTTTAAGCAAATGGGTACTT
GGTACCACATCGGGAGCTTATCTATCACAAGGTGAGCAATTTACTCATATCAAAGCGTCAGCGAAGCATTTCGTTGCCAA
ACTGTACTTTTCTCCCACTCGTCGTGAGTTACTGGTGGGGACGCTAAATGGTGCTGCGCTCATTGATATTTTAAAGCCGA
CTCAAAAAAACATCATGATTGGAGAGTCTCATGTGCTTTCGATGACAGAAACCAATCAAGAATATTGGATTGGCACAGAA
CATGGTCTGTACAGTTACTCGTTTTTAAATGGACAAGTGGCCAAAGTGAAAGCCGCAGGTGCGCAAGATGTCTCTCCTGA
TAATCGAAAAATTTACTCGCTGGTGAATGATGAACAAGGGGGCATTTGGGTTGCGACGAATAGTGGCATTCTCTACTACT
CTCTGTTTGGCCGAAAATTTGAACGTCTTAATAACATCACCGAAGAAAAAGCCAGCCGTTTTAATGGCAACATCACCAAA
ATTGTCTATGCATCAGATGAAACGATTTGGTTTAAAGATGCAAACAATCTTTACCGGGCCATTGGGGTTAATAAACAATA
CAGCCGCGTGCGTTTGCCGATAAAGGTAAATGACTTTGCCCTTGAAGATGGAAACATCTGGATTGCTTCCGAGCAAGGTT
TGTATATTTACGACACGAATCAGTACAAACTTCGATCGTTCGATTTACCGAGTTACCTTAAAGGTAAAGAGATTGATTTT
GTTTCGGTCAGCCCTCAAGGCAAGGTTTGGATCAGTTCGGGTTATCGATTAGCCGCCATTGGCGTTGCCGATGGGCGCTT
CCAAGATTATGGCGATCGGTGGATTGCCAGCCAAAATTTGCCCGCTCGAATTTTGGGTCTAGAAGTGGATCAAAAAGTTC
CGTTAATCGTAAGAACCGATCACGGGGCTTATGTGCTAGAAAACGACAAGATCCGTTTTGAGCGAAACACGCAGTCTTTT
GGCGAAAGTGTCGATATTGCAGAAGCGAAAGATGGGTCGCTATGGTTTGCAGGGACTCACGGCATCTATCGTAAAGATCC
CACAGAAAAAACGTTAGGAGAGCTGGCACTTCCTCAGGAAAACGTGAAGCCTATTTGCCTAATCACCGATGCTAGTGGCA
TTTGGATGGTGAGTTCAATTGGCCTCAGTTTTTACAATTTTGACGGAGCACTGCGTAAGCACTTTGGGTCTCGCTCGGGC
ATTATGAGTAACGAGTTCGTTGAAGGCTCATGTGCGGCTTCATTTGGAGAAGCGCAATCTGGCTCGGTGTTAGTACTGGG
TTCAAAGCATGGCTTGATATTTGCGGACCGTGATGACCTAATGGTATCCAAACTACCTGAACCTAGAGTGGTCATCAGCC
AAGTTCGTATTGATGAGCAGGTTGCAAATGTCGGACAAAAAGAGTGGCAATTACCCGAGTTAGCGTATGGTTCTGCGATC
AGTTTTGGCCTCGGCGTGATGCCCAATGCTTACGGTGAAACGCTATATTACCGTTTAAATCAGGAACACTGGCAAACCAC
AGAAGCCGGACAAGTCTCTTTTGAACACCTTGCGGCAGGTGATTACTTGTTAAGTGTTAAAACCAGTTTAGTCGCAGGGG
ATTCCGTGCAAGTTCGCTTTACGGTGTTACACCCGTGGTATCAAACTACGATGGCGATGGCGATTTTTGTTCTGCTTATC
GTAGCGCTGGGCGGCTTAGTTGTTTTCTGGCGTTCTCGTTACGTCAGTGTTCAAAACCGTGAGTTAACGGCATTGGTGGC
ATTGAAGACCAATCAATTACGTCATCAGAGTCGAGTGTTGCTCACCAGTAACCAACAACTTCGCAAACAGATCCAAGTTA
GAAATTTGCTGGTTGACAATGTTGCCCGTTCATTACGTCAAAGTGTGGATGCATTACTGAGCAAGCCATCGGTTGAACCT
GCCTCAGAGTATCAGGAACATCAAATGCGCATAGCAATGCTTTTGGAAGAGTTAAAAAGCTCGCCCAGCGATGGAACTGA
CGGGTATCTGCAAAACTTTAACGTCAGCCATATCATTCAGTCGGTTGTCGACGTTTGGGAAGATGAACTCAGTAAAATCG
GTGTTCAGGTGCACATTTCTAGCGAATCGGATGACTATCGTGTCGCAGTAGGGCAGTTTAATCTGGATGTCATTTTTAAT
AGTGTTTTTGCAAGTGTGTTGAAACGTGCCTATCGTGGCCAAATGCTTGATATTGTGATCAGAGAGCAAAACGATTTTGT
CGAAGTGTCATTTATTGATTTTGGCCAGCCCTTTAGCACGAATACGGACGCCGAGGATAGCGCTGGTGTTGAGCCAGCAA
AAGTCGATACTGCAATTGAGAAGCTACCTGCTTTAGTCGAACAAAGTGGCGGACGCTTAAGCTTGTTCAGTAGCGCTGAG
CGAAACAAGATCGAAATACTGTGGCCGAAAGCGGTTGAGTCTCTGATAAATGACGAAGAGCCAAGCGTTTTTGTTGATTC
AGTCGATCCCTCTCCAGCTACGGAAGTCTCATCCGAAGGCGCTCCATCGCCAGAGCAGTTGTGGCTGGCGAAGGTCGAGG
CTATGGTGGCAGAGCATTATACAAACCCAGAATTTGGCACAGCAATGGCGGCCAAGATGCTCTATGTTTCTGAGCGCAGC
CTACAGAGACGGTTTAAATCAGCGAGCTCTCGTACATTTACGGATTACCTCACCGAAGTTCGTTTAGAAAAAGCATGCGA
AAGTTTGTTGGCTGGTGAAAAAGTGGTTGATGTGGCTTTCGCATCGGGATTTAACGATCCTTCCTATTTTAGTCAACGTT
TTAAACTGTACTTTGGCGTGCCCCCTTCAAAATTTGCCAGTGACGCTCTAGAGTCCGAATAA

Domains

Predicted by InterProScan.

• Helix-turn-helix domain (HTH_18) (1031-1105)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tfoS	Vibrio cholerae O1 biovar El Tor strain E7946	39.41	100	0.396