Detailed information
Bioinformatically predicted
Overview
| Name | tfoS | Type | Regulator |
| Locus tag | GPY16_RS11105 | Genome accession | NZ_CP046832 |
| Coordinates | 2394233..2397637 (-) | Length | 1134 a.a. |
| NCBI ID | WP_158105412.1 | Uniprot ID | - |
| Organism | Vibrio vulnificus strain 06-2410 | ||
| Function | chitin sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2389233..2402637
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY16_RS11085 | - | 2390169..2390597 (+) | 429 | WP_038968899.1 | HIT domain-containing protein | - |
| GPY16_RS11090 | - | 2390706..2390936 (-) | 231 | WP_038968900.1 | FeoC-like transcriptional regulator | - |
| GPY16_RS11095 | feoB | 2390933..2393209 (-) | 2277 | WP_158105411.1 | Fe(2+) transporter permease subunit FeoB | - |
| GPY16_RS11100 | - | 2393209..2393436 (-) | 228 | WP_017421006.1 | FeoA family protein | - |
| GPY16_RS11105 | tfoS | 2394233..2397637 (-) | 3405 | WP_158105412.1 | AraC family transcriptional regulator | Regulator |
| GPY16_RS11110 | znuA | 2397809..2398684 (-) | 876 | WP_045588765.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| GPY16_RS11115 | znuC | 2398766..2399551 (+) | 786 | WP_017421009.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| GPY16_RS11120 | znuB | 2399544..2400329 (+) | 786 | WP_158105590.1 | zinc ABC transporter permease subunit ZnuB | - |
| GPY16_RS11125 | sucD | 2400411..2401283 (-) | 873 | WP_017421011.1 | succinate--CoA ligase subunit alpha | - |
| GPY16_RS11130 | sucC | 2401283..2402449 (-) | 1167 | WP_017421012.1 | ADP-forming succinate--CoA ligase subunit beta | - |
Sequence
Protein
Download Length: 1134 a.a. Molecular weight: 126549.16 Da Isoelectric Point: 5.4543
>NTDB_id=356185 GPY16_RS11105 WP_158105412.1 2394233..2397637(-) (tfoS) [Vibrio vulnificus strain 06-2410]
MLRILAWLLLAGFTLPFKALALDGNSAIFYPLPGQEQGTFVAAKNLFVGGDGGLWIHDVHGKVQYFDGNTLLPKRGSLLE
YPSEQVAFHQGSFWTFVANEVFQTYPNQKRQLAFSLNPGAEIRKIGSSDGHIWVSDGINFYDYDIESKELKTYSLLSLYQ
NNQSSYVYINDAKRVLSKWVLGTTSGAYLSQGEQFTHIKASAKHFVAKLYFSPTRRELLVGTLNGAALIDILKPTQKNIM
IGESHVLSMTETNQEYWIGTEHGLYSYSFLNGQVAKVKAAGAQDVSPDNRKIYSLVNDEQGGIWVATNSGILYYSLFGRK
FERLNNITEEKASRFNGNITKIVYASDETIWFKDANNLYRAIGVNKQYSRVRLPIKVNDFALEDGNIWIASEQGLYIYDT
NQYKLRSFDLPSYLKGKEIDFVSVSPQGKVWISSGYRLAAIGVADGRFQDYGDRWIASQNLPARILGLEVDQKVPLIVRT
DHGAYVLENDKIRFERNTQSFGESVDIAEAKDGSLWFAGTHGIYRKDPTEKTLGELALPQENVKPICLITDASGIWMVSS
IGLSFYNFDGALRKHFGSRSGIMSNEFVEGSCAASFGEAQSGSVLVLGSKHGLVFAGRDDLMVSKLPEPRVVISQVRIDD
QVANVGQKEWQLPELAYGSAISFGLGVMPNAYGETLYYRLNQEHWQTTEAGQVSFEHLAAGDYLLSVKTSLVAGDSVQVR
FTVLHPWYQTTMAMAIFVLLIVALGGLVVFWRSRYVSVQNRELTALVALKTNQLRHQSRVLLTSNQQLRKQIQVRNLLVD
NVARSLRQSVDALLSKPSVEPVSEYQEHQMRIAMLLEELKSSPSDGTDGYLQNFNVSHIIQSVVDVWEDELSKIGVQVHI
SSESDDYRVAVGQFNLDVIFNSVFASVLKRAYRGQMLDIVIREQNDFVEVSFIDFGQPFSTNTDAEDSAAVEPAKVDTAI
EKLPALVEQSGGRLSLFSSAERNKIEILWPKAVESLINDEEPSVFVDSVDPSPVTEVSSEGAPSPEQLWLAKVEAMVAEH
YTNPEFGTAMAAKMLYVSERSLQRRFKSASSRTFTDYLTEVRLEKACESLLAGEKVVDVAFASGFNDPSYFSQRFKLYFG
VPPSKFASDALESE
MLRILAWLLLAGFTLPFKALALDGNSAIFYPLPGQEQGTFVAAKNLFVGGDGGLWIHDVHGKVQYFDGNTLLPKRGSLLE
YPSEQVAFHQGSFWTFVANEVFQTYPNQKRQLAFSLNPGAEIRKIGSSDGHIWVSDGINFYDYDIESKELKTYSLLSLYQ
NNQSSYVYINDAKRVLSKWVLGTTSGAYLSQGEQFTHIKASAKHFVAKLYFSPTRRELLVGTLNGAALIDILKPTQKNIM
IGESHVLSMTETNQEYWIGTEHGLYSYSFLNGQVAKVKAAGAQDVSPDNRKIYSLVNDEQGGIWVATNSGILYYSLFGRK
FERLNNITEEKASRFNGNITKIVYASDETIWFKDANNLYRAIGVNKQYSRVRLPIKVNDFALEDGNIWIASEQGLYIYDT
NQYKLRSFDLPSYLKGKEIDFVSVSPQGKVWISSGYRLAAIGVADGRFQDYGDRWIASQNLPARILGLEVDQKVPLIVRT
DHGAYVLENDKIRFERNTQSFGESVDIAEAKDGSLWFAGTHGIYRKDPTEKTLGELALPQENVKPICLITDASGIWMVSS
IGLSFYNFDGALRKHFGSRSGIMSNEFVEGSCAASFGEAQSGSVLVLGSKHGLVFAGRDDLMVSKLPEPRVVISQVRIDD
QVANVGQKEWQLPELAYGSAISFGLGVMPNAYGETLYYRLNQEHWQTTEAGQVSFEHLAAGDYLLSVKTSLVAGDSVQVR
FTVLHPWYQTTMAMAIFVLLIVALGGLVVFWRSRYVSVQNRELTALVALKTNQLRHQSRVLLTSNQQLRKQIQVRNLLVD
NVARSLRQSVDALLSKPSVEPVSEYQEHQMRIAMLLEELKSSPSDGTDGYLQNFNVSHIIQSVVDVWEDELSKIGVQVHI
SSESDDYRVAVGQFNLDVIFNSVFASVLKRAYRGQMLDIVIREQNDFVEVSFIDFGQPFSTNTDAEDSAAVEPAKVDTAI
EKLPALVEQSGGRLSLFSSAERNKIEILWPKAVESLINDEEPSVFVDSVDPSPVTEVSSEGAPSPEQLWLAKVEAMVAEH
YTNPEFGTAMAAKMLYVSERSLQRRFKSASSRTFTDYLTEVRLEKACESLLAGEKVVDVAFASGFNDPSYFSQRFKLYFG
VPPSKFASDALESE
Nucleotide
Download Length: 3405 bp
>NTDB_id=356185 GPY16_RS11105 WP_158105412.1 2394233..2397637(-) (tfoS) [Vibrio vulnificus strain 06-2410]
TTGCTGCGTATTCTTGCCTGGCTTCTACTCGCTGGGTTTACACTACCGTTTAAAGCGCTAGCTTTGGACGGAAACTCCGC
CATATTTTACCCACTGCCTGGACAGGAGCAGGGAACCTTTGTTGCCGCTAAAAACCTCTTTGTTGGCGGTGATGGTGGTT
TATGGATACATGACGTGCACGGCAAAGTGCAATATTTCGATGGTAATACCTTGTTGCCGAAACGTGGCAGCCTTCTAGAG
TATCCTTCCGAGCAAGTGGCCTTTCACCAAGGCAGTTTTTGGACTTTTGTCGCGAACGAAGTCTTCCAAACGTACCCCAA
TCAGAAACGTCAGTTAGCGTTTAGCTTAAATCCGGGGGCAGAAATCAGAAAAATTGGCAGCTCAGATGGTCACATTTGGG
TGAGTGATGGCATCAATTTTTATGACTACGATATTGAATCAAAAGAATTAAAAACTTATTCCTTACTCTCGTTGTATCAA
AATAATCAGAGTAGTTACGTCTACATCAATGATGCAAAGAGGGTTTTAAGCAAATGGGTACTTGGTACCACATCGGGAGC
TTATCTATCACAAGGTGAGCAATTTACTCATATCAAAGCGTCAGCGAAGCATTTCGTTGCCAAACTGTACTTTTCTCCCA
CTCGTCGTGAGTTACTGGTGGGGACGCTAAATGGTGCTGCGCTCATTGATATTTTAAAGCCGACTCAAAAAAACATCATG
ATTGGAGAGTCTCATGTGCTTTCGATGACAGAAACCAATCAAGAATATTGGATTGGCACAGAACATGGTCTGTACAGTTA
CTCGTTTTTAAATGGACAAGTGGCCAAAGTGAAAGCCGCAGGTGCGCAAGATGTCTCTCCTGATAATCGAAAAATTTACT
CGCTGGTGAATGATGAACAAGGGGGCATTTGGGTTGCGACGAACAGTGGCATTCTCTACTACTCTCTGTTTGGCCGAAAA
TTTGAACGTCTTAATAACATCACCGAAGAAAAAGCCAGCCGTTTTAATGGCAACATCACCAAAATTGTCTATGCATCAGA
TGAAACGATTTGGTTTAAAGATGCAAACAATCTTTACCGGGCCATTGGGGTTAATAAACAATACAGCCGCGTGCGTTTGC
CGATAAAGGTAAATGACTTTGCCCTTGAAGATGGAAACATCTGGATTGCTTCCGAGCAAGGCTTGTATATTTACGACACG
AATCAGTACAAACTTCGATCGTTCGATTTACCGAGTTACCTTAAAGGTAAAGAGATTGATTTTGTTTCGGTCAGCCCTCA
AGGCAAGGTTTGGATCAGTTCGGGCTATCGATTAGCCGCCATTGGCGTTGCCGATGGGCGCTTCCAAGATTATGGCGATC
GGTGGATTGCCAGCCAAAATTTGCCCGCTCGAATTTTGGGTCTAGAAGTGGATCAAAAAGTCCCGTTAATCGTAAGAACC
GATCACGGGGCTTATGTGCTAGAAAACGACAAGATCCGTTTTGAGCGAAACACGCAGTCTTTTGGCGAAAGTGTCGATAT
TGCAGAAGCGAAAGATGGGTCGCTATGGTTTGCAGGGACTCACGGCATCTATCGTAAAGATCCCACAGAAAAAACGTTAG
GAGAGCTGGCACTTCCTCAGGAAAACGTGAAGCCTATTTGCCTAATCACCGATGCTAGTGGCATTTGGATGGTGAGTTCA
ATTGGCCTCAGTTTTTACAATTTTGACGGAGCACTGCGTAAGCACTTTGGGTCTCGCTCGGGAATTATGAGTAACGAGTT
CGTTGAAGGCTCATGTGCGGCTTCATTTGGAGAAGCGCAATCCGGCTCGGTGTTAGTACTGGGTTCAAAGCATGGCTTGG
TATTTGCGGGCCGTGATGACCTAATGGTATCCAAACTACCTGAACCTAGAGTGGTCATCAGCCAAGTTCGTATTGATGAT
CAGGTTGCAAATGTCGGACAAAAAGAGTGGCAATTGCCCGAGTTAGCGTATGGTTCTGCGATCAGTTTTGGCCTCGGCGT
GATGCCCAATGCTTACGGTGAAACGCTCTATTACCGTTTAAACCAGGAACACTGGCAAACCACAGAAGCCGGACAAGTCT
CTTTTGAACACCTTGCGGCAGGTGATTACTTGTTAAGTGTTAAAACCAGTTTAGTCGCAGGGGATTCCGTGCAAGTTCGC
TTTACGGTGTTACACCCGTGGTATCAAACTACGATGGCGATGGCGATTTTTGTTCTGCTTATCGTAGCGTTAGGCGGCTT
AGTTGTTTTCTGGCGTTCTCGTTACGTCAGTGTTCAAAACCGTGAGTTAACGGCATTGGTGGCATTGAAGACCAATCAAT
TACGTCATCAGAGTCGAGTGTTGCTCACCAGTAACCAACAACTTCGCAAACAGATCCAAGTTAGAAATTTGCTGGTTGAC
AATGTTGCCCGTTCATTACGTCAAAGTGTGGATGCATTACTGAGCAAGCCATCGGTTGAACCTGTCTCAGAGTATCAGGA
ACATCAAATGCGCATAGCAATGCTTTTGGAAGAGTTAAAAAGCTCGCCCAGCGATGGAACTGACGGGTATCTGCAAAACT
TTAACGTCAGCCATATCATTCAGTCGGTTGTCGACGTTTGGGAAGATGAACTCAGTAAAATCGGTGTTCAGGTGCACATT
TCTAGCGAATCGGATGACTATCGTGTCGCAGTAGGGCAGTTTAATCTAGATGTCATTTTTAATAGTGTTTTTGCAAGTGT
GTTGAAACGCGCCTATCGTGGCCAAATGCTTGATATTGTGATCAGAGAGCAAAACGATTTTGTCGAAGTGTCATTTATTG
ATTTTGGCCAGCCCTTTAGTACGAATACGGACGCCGAGGATAGCGCTGCTGTTGAGCCGGCAAAAGTCGATACTGCAATT
GAGAAGCTACCTGCTTTAGTCGAACAAAGTGGCGGACGCTTAAGCTTGTTCAGTAGCGCTGAGCGAAACAAGATCGAAAT
ACTGTGGCCGAAAGCGGTTGAGTCTCTGATAAATGACGAAGAGCCAAGCGTTTTTGTTGATTCAGTCGATCCCTCTCCAG
TTACGGAAGTCTCATCCGAAGGCGCTCCATCGCCAGAGCAGTTGTGGCTGGCGAAGGTCGAGGCTATGGTGGCAGAGCAT
TATACAAACCCAGAATTTGGCACGGCAATGGCGGCCAAGATGCTCTATGTTTCTGAGCGCAGCCTACAGAGACGGTTTAA
ATCAGCGAGCTCTCGTACATTTACGGATTACCTCACCGAAGTTCGTTTAGAAAAAGCATGCGAAAGTTTGTTGGCCGGTG
AAAAAGTGGTTGATGTGGCTTTCGCATCGGGATTTAACGATCCTTCCTATTTTAGTCAACGTTTTAAACTGTACTTTGGC
GTGCCCCCTTCAAAATTTGCCAGTGACGCTCTAGAGTCCGAATAA
TTGCTGCGTATTCTTGCCTGGCTTCTACTCGCTGGGTTTACACTACCGTTTAAAGCGCTAGCTTTGGACGGAAACTCCGC
CATATTTTACCCACTGCCTGGACAGGAGCAGGGAACCTTTGTTGCCGCTAAAAACCTCTTTGTTGGCGGTGATGGTGGTT
TATGGATACATGACGTGCACGGCAAAGTGCAATATTTCGATGGTAATACCTTGTTGCCGAAACGTGGCAGCCTTCTAGAG
TATCCTTCCGAGCAAGTGGCCTTTCACCAAGGCAGTTTTTGGACTTTTGTCGCGAACGAAGTCTTCCAAACGTACCCCAA
TCAGAAACGTCAGTTAGCGTTTAGCTTAAATCCGGGGGCAGAAATCAGAAAAATTGGCAGCTCAGATGGTCACATTTGGG
TGAGTGATGGCATCAATTTTTATGACTACGATATTGAATCAAAAGAATTAAAAACTTATTCCTTACTCTCGTTGTATCAA
AATAATCAGAGTAGTTACGTCTACATCAATGATGCAAAGAGGGTTTTAAGCAAATGGGTACTTGGTACCACATCGGGAGC
TTATCTATCACAAGGTGAGCAATTTACTCATATCAAAGCGTCAGCGAAGCATTTCGTTGCCAAACTGTACTTTTCTCCCA
CTCGTCGTGAGTTACTGGTGGGGACGCTAAATGGTGCTGCGCTCATTGATATTTTAAAGCCGACTCAAAAAAACATCATG
ATTGGAGAGTCTCATGTGCTTTCGATGACAGAAACCAATCAAGAATATTGGATTGGCACAGAACATGGTCTGTACAGTTA
CTCGTTTTTAAATGGACAAGTGGCCAAAGTGAAAGCCGCAGGTGCGCAAGATGTCTCTCCTGATAATCGAAAAATTTACT
CGCTGGTGAATGATGAACAAGGGGGCATTTGGGTTGCGACGAACAGTGGCATTCTCTACTACTCTCTGTTTGGCCGAAAA
TTTGAACGTCTTAATAACATCACCGAAGAAAAAGCCAGCCGTTTTAATGGCAACATCACCAAAATTGTCTATGCATCAGA
TGAAACGATTTGGTTTAAAGATGCAAACAATCTTTACCGGGCCATTGGGGTTAATAAACAATACAGCCGCGTGCGTTTGC
CGATAAAGGTAAATGACTTTGCCCTTGAAGATGGAAACATCTGGATTGCTTCCGAGCAAGGCTTGTATATTTACGACACG
AATCAGTACAAACTTCGATCGTTCGATTTACCGAGTTACCTTAAAGGTAAAGAGATTGATTTTGTTTCGGTCAGCCCTCA
AGGCAAGGTTTGGATCAGTTCGGGCTATCGATTAGCCGCCATTGGCGTTGCCGATGGGCGCTTCCAAGATTATGGCGATC
GGTGGATTGCCAGCCAAAATTTGCCCGCTCGAATTTTGGGTCTAGAAGTGGATCAAAAAGTCCCGTTAATCGTAAGAACC
GATCACGGGGCTTATGTGCTAGAAAACGACAAGATCCGTTTTGAGCGAAACACGCAGTCTTTTGGCGAAAGTGTCGATAT
TGCAGAAGCGAAAGATGGGTCGCTATGGTTTGCAGGGACTCACGGCATCTATCGTAAAGATCCCACAGAAAAAACGTTAG
GAGAGCTGGCACTTCCTCAGGAAAACGTGAAGCCTATTTGCCTAATCACCGATGCTAGTGGCATTTGGATGGTGAGTTCA
ATTGGCCTCAGTTTTTACAATTTTGACGGAGCACTGCGTAAGCACTTTGGGTCTCGCTCGGGAATTATGAGTAACGAGTT
CGTTGAAGGCTCATGTGCGGCTTCATTTGGAGAAGCGCAATCCGGCTCGGTGTTAGTACTGGGTTCAAAGCATGGCTTGG
TATTTGCGGGCCGTGATGACCTAATGGTATCCAAACTACCTGAACCTAGAGTGGTCATCAGCCAAGTTCGTATTGATGAT
CAGGTTGCAAATGTCGGACAAAAAGAGTGGCAATTGCCCGAGTTAGCGTATGGTTCTGCGATCAGTTTTGGCCTCGGCGT
GATGCCCAATGCTTACGGTGAAACGCTCTATTACCGTTTAAACCAGGAACACTGGCAAACCACAGAAGCCGGACAAGTCT
CTTTTGAACACCTTGCGGCAGGTGATTACTTGTTAAGTGTTAAAACCAGTTTAGTCGCAGGGGATTCCGTGCAAGTTCGC
TTTACGGTGTTACACCCGTGGTATCAAACTACGATGGCGATGGCGATTTTTGTTCTGCTTATCGTAGCGTTAGGCGGCTT
AGTTGTTTTCTGGCGTTCTCGTTACGTCAGTGTTCAAAACCGTGAGTTAACGGCATTGGTGGCATTGAAGACCAATCAAT
TACGTCATCAGAGTCGAGTGTTGCTCACCAGTAACCAACAACTTCGCAAACAGATCCAAGTTAGAAATTTGCTGGTTGAC
AATGTTGCCCGTTCATTACGTCAAAGTGTGGATGCATTACTGAGCAAGCCATCGGTTGAACCTGTCTCAGAGTATCAGGA
ACATCAAATGCGCATAGCAATGCTTTTGGAAGAGTTAAAAAGCTCGCCCAGCGATGGAACTGACGGGTATCTGCAAAACT
TTAACGTCAGCCATATCATTCAGTCGGTTGTCGACGTTTGGGAAGATGAACTCAGTAAAATCGGTGTTCAGGTGCACATT
TCTAGCGAATCGGATGACTATCGTGTCGCAGTAGGGCAGTTTAATCTAGATGTCATTTTTAATAGTGTTTTTGCAAGTGT
GTTGAAACGCGCCTATCGTGGCCAAATGCTTGATATTGTGATCAGAGAGCAAAACGATTTTGTCGAAGTGTCATTTATTG
ATTTTGGCCAGCCCTTTAGTACGAATACGGACGCCGAGGATAGCGCTGCTGTTGAGCCGGCAAAAGTCGATACTGCAATT
GAGAAGCTACCTGCTTTAGTCGAACAAAGTGGCGGACGCTTAAGCTTGTTCAGTAGCGCTGAGCGAAACAAGATCGAAAT
ACTGTGGCCGAAAGCGGTTGAGTCTCTGATAAATGACGAAGAGCCAAGCGTTTTTGTTGATTCAGTCGATCCCTCTCCAG
TTACGGAAGTCTCATCCGAAGGCGCTCCATCGCCAGAGCAGTTGTGGCTGGCGAAGGTCGAGGCTATGGTGGCAGAGCAT
TATACAAACCCAGAATTTGGCACGGCAATGGCGGCCAAGATGCTCTATGTTTCTGAGCGCAGCCTACAGAGACGGTTTAA
ATCAGCGAGCTCTCGTACATTTACGGATTACCTCACCGAAGTTCGTTTAGAAAAAGCATGCGAAAGTTTGTTGGCCGGTG
AAAAAGTGGTTGATGTGGCTTTCGCATCGGGATTTAACGATCCTTCCTATTTTAGTCAACGTTTTAAACTGTACTTTGGC
GTGCCCCCTTCAAAATTTGCCAGTGACGCTCTAGAGTCCGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| tfoS | Vibrio cholerae O1 biovar El Tor strain E7946 |
39.51 |
100 |
0.399 |