Detailed information NTG0356172

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GPY16_RS09525
• Genome accession: NZ_CP046832
• Coordinates: 2043465..2044331 (-)
• Length: 288 a.a.
• NCBI ID: WP_011080789.1
• Uniprot ID: A0A3Q0L702
• Organism: Vibrio vulnificus strain 06-2410
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2038465..2049331

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY16_RS09515	-	2041533..2042402 (-)	870	WP_038940229.1	hypothetical protein	-
GPY16_RS09520	-	2042632..2043462 (-)	831	WP_158105325.1	ABC transporter ATP-binding protein	-
GPY16_RS09525	amiE	2043465..2044331 (-)	867	WP_011080789.1	ABC transporter ATP-binding protein	Regulator
GPY16_RS09530	-	2044350..2046191 (-)	1842	WP_158105326.1	extracellular solute-binding protein	-
GPY16_RS09535	-	2046218..2047261 (-)	1044	WP_011080791.1	ABC transporter permease	-
GPY16_RS09540	-	2047261..2048283 (-)	1023	WP_011080792.1	ABC transporter permease subunit	-

Sequence

Protein

• Length: 288 a.a.
• Molecular weight: 32120.52 Da
• Isoelectric Point: 5.1128

>NTDB_id=356172 GPY16_RS09525 WP_011080789.1 2043465..2044331(-) (amiE) [Vibrio vulnificus strain 06-2410]
MNSEVVLSVKNLETEFQTDDGAVQVLHGVSFDVKKGRTLGLVGESGCGKSVTSMSIMGLLPKPYGRVIGGEILYRGKDLV
TLPADEMYAMRGDRISIIFQDPMTALNPVHTVGKQLMEVLKLHRPDLDRKARREQALEMLKKVRIPMPEKRLDEYPHNLS
GGMRQRVMIAMALACKPEILICDEPTTALDVTVQASILELINELQEETGMAVIFITHDLGVVAEICDDVAVMYGGKIVEY
ADVFELFDAPKHPYTERLMGLMPSLEHEPKQLIEIKPIDVSKFPEFRG

Nucleotide

• Length: 867 bp

>NTDB_id=356172 GPY16_RS09525 WP_011080789.1 2043465..2044331(-) (amiE) [Vibrio vulnificus strain 06-2410]
ATGAACAGTGAAGTAGTTCTAAGCGTTAAAAACTTAGAGACTGAGTTTCAAACGGATGATGGTGCTGTACAAGTACTCCA
TGGTGTCAGTTTTGATGTAAAAAAAGGACGTACACTAGGTTTGGTTGGCGAATCTGGATGTGGAAAAAGTGTCACGTCCA
TGTCTATCATGGGCTTGTTGCCTAAGCCGTACGGACGAGTTATTGGTGGCGAAATCCTCTATCGAGGCAAAGATCTCGTC
ACTCTTCCTGCGGATGAAATGTATGCCATGCGCGGAGATCGTATTTCGATCATCTTCCAAGATCCTATGACAGCACTCAA
TCCTGTCCATACGGTAGGTAAGCAGCTTATGGAAGTATTGAAGCTTCATCGACCTGATTTGGATAGAAAAGCCCGTCGTG
AACAGGCGTTGGAAATGTTGAAAAAAGTTCGCATCCCAATGCCTGAAAAGCGTTTAGATGAGTACCCACATAATTTATCT
GGTGGTATGAGACAGCGAGTCATGATTGCAATGGCGTTGGCTTGCAAGCCTGAGATTCTGATTTGCGACGAACCCACAAC
CGCTCTAGATGTTACCGTTCAGGCCTCAATATTGGAGTTAATTAATGAACTGCAAGAAGAGACAGGCATGGCGGTTATCT
TTATTACCCATGACCTCGGTGTCGTAGCAGAGATATGTGATGATGTAGCGGTCATGTATGGCGGCAAGATAGTCGAATAT
GCCGATGTTTTTGAATTGTTTGATGCCCCTAAACACCCTTATACAGAGCGATTAATGGGATTGATGCCAAGTTTAGAGCA
TGAACCTAAACAATTAATCGAAATTAAGCCAATTGACGTTTCAAAATTTCCTGAATTTCGAGGTTAA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (238-276)

• ABC transporter (ABC_tran) (26-186)

3D structure

• AlphaFold DB: A0A3Q0L702

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	50.909	95.486	0.486
amiE	Streptococcus thermophilus LMD-9	50.909	95.486	0.486
amiE	Streptococcus salivarius strain HSISS4	50.545	95.486	0.483
oppD	Streptococcus mutans UA159	50.379	91.667	0.462