Detailed information NTG0356136

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: GPY16_RS02380
• Genome accession: NZ_CP046832
• Coordinates: 492740..495562 (-)
• Length: 940 a.a.
• NCBI ID: WP_026050227.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 06-2410
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 487740..500562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY16_RS02365	lysC	487862..489211 (-)	1350	WP_039449559.1	lysine-sensitive aspartokinase 3	-
GPY16_RS02370	-	489725..490846 (+)	1122	WP_103163717.1	alanine--glyoxylate aminotransferase family protein	-
GPY16_RS02375	-	490910..492673 (-)	1764	WP_158104948.1	PglL family O-oligosaccharyltransferase	-
GPY16_RS02380	uvrA	492740..495562 (-)	2823	WP_026050227.1	excinuclease ABC subunit UvrA	Machinery gene
GPY16_RS02385	galU	495705..496577 (-)	873	WP_158104949.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
GPY16_RS02390	qstR	496763..497410 (-)	648	WP_017420064.1	response regulator transcription factor	Regulator
GPY16_RS02395	ssb	497710..498249 (+)	540	WP_011079389.1	single-stranded DNA-binding protein	Machinery gene
GPY16_RS02400	csrD	498402..500399 (+)	1998	WP_026130604.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 104003.36 Da
• Isoelectric Point: 6.4491

>NTDB_id=356136 GPY16_RS02380 WP_026050227.1 492740..495562(-) (uvrA) [Vibrio vulnificus strain 06-2410]
MDKIEVRGARTHNLKNVNLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEHQVPLAAQTISQMVDKVLELPEGAKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPTLELHKKHTIEVVVDRFKVRSDLQQRLAESFETALELSGGIAVIAPMEGD
GEESVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPDRVIQDANLSLAQGAIRGWDQKNYYYFQML
TSLAEHYDFDLHVPFNSLSKRIQEVILKGSGRTEIEFKYINDRGDIRLKRHPFEGILNTLERRYRDTESNSVREELVKYI
STKPCASCGGTRLRLEARNVFINDTTLPQIVELSIADALTFFATLKLDGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGQVVAEGTMAEILANPDSLTGQYLSGAKQIIVPTQRTPRDKNKTVELIGASGNNLKDVNLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVHYKGKSIDEVLEMTVEDARDFFD
PVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=356136 GPY16_RS02380 WP_026050227.1 492740..495562(-) (uvrA) [Vibrio vulnificus strain 06-2410]
ATGGACAAGATAGAAGTTCGCGGAGCACGTACCCATAATCTCAAAAATGTTAATCTCACTATCCCACGAGATAAGTTGAT
CGTCATTACTGGCTTATCGGGTTCAGGGAAATCTTCTTTGGCCTTTGATACCCTTTACGCTGAAGGTCAACGACGTTATG
TAGAATCCCTGTCAGCCTACGCTCGCCAGTTTCTCTCTTTGATGGAAAAGCCCGATGTTGACCACATTGAAGGCCTCTCG
CCAGCAATTTCTATCGAGCAGAAATCCACCTCACACAACCCGCGTTCAACCGTAGGGACCATCACAGAAGTGTATGACTA
CCTTCGCCTACTGTATGCCCGCGTTGGTGAGCCTCGCTGTCCTGAACATCAAGTCCCTTTAGCCGCCCAAACCATTAGCC
AAATGGTCGACAAAGTTCTGGAGCTGCCTGAAGGTGCCAAAATGATGTTGCTCGCCCCCATCGTAAAAGAGCGCAAAGGC
GAACACGTTAAAACATTAGAGAACCTTGCTGCTCAAGGTTTTATCCGTGCACGTATTGACGGAGAGACCTGTGACCTCAC
CGATCCACCAACGCTAGAGTTACACAAAAAGCACACCATTGAAGTGGTGGTTGACCGCTTTAAAGTACGTAGCGATTTAC
AACAAAGACTCGCAGAATCCTTTGAGACGGCACTGGAACTATCAGGCGGCATCGCTGTGATTGCCCCTATGGAGGGTGAC
GGTGAAGAGAGCGTTTTTTCCGCCAATTTTGCGTGTCCCCACTGTGGTTATAGTATGCAAGAGCTTGAGCCACGTTTGTT
TTCGTTCAATAACCCAGCCGGTGCATGTGGTACTTGTGATGGCCTCGGGGTACAACAATATTTTGATCCTGACCGAGTGA
TTCAAGATGCCAATTTAAGTCTTGCGCAAGGGGCGATTCGTGGTTGGGATCAGAAAAACTATTACTATTTCCAAATGCTC
ACATCGCTGGCTGAGCATTACGATTTCGATTTACATGTCCCTTTTAATTCGCTTTCAAAACGCATCCAAGAAGTGATCTT
AAAAGGCTCAGGACGCACTGAAATCGAATTTAAGTACATCAACGATCGAGGCGACATTCGTCTAAAACGTCATCCATTTG
AAGGCATTCTCAATACACTCGAACGCCGATATCGCGACACAGAATCTAACTCAGTACGAGAGGAGTTGGTAAAATATATC
TCCACCAAACCTTGCGCCAGTTGTGGCGGAACACGTCTGCGCCTAGAAGCTCGCAATGTGTTTATTAATGACACGACATT
GCCGCAAATCGTCGAGTTGAGTATCGCTGATGCATTGACCTTTTTCGCCACCTTAAAACTTGACGGTCAGCGAGCTCAAA
TTGCTGAGAAGGTCATGAAAGAGATCAACGATCGACTGCAGTTTTTAGTCAATGTTGGCCTCAATTATTTGAACTTGTCT
CGCAGCGCTGAAACCTTGTCTGGTGGCGAAGCGCAGCGTATTCGTCTGGCTAGTCAGATCGGTGCCGGTTTGGTCGGCGT
GATGTACGTGCTCGATGAGCCATCAATAGGCCTTCACCAGCGTGACAATGAGCGCTTACTCAAAACACTGACGCACTTAC
GCGATCTCGGCAATACCGTATTAGTCGTAGAGCATGATGAAGATGCGATTCGTTGTGCCGACCATGTGATTGACATTGGC
CCTGGTGCTGGCGTACATGGTGGCCAAGTGGTTGCCGAAGGAACAATGGCCGAGATTCTCGCCAATCCAGATTCCTTGAC
CGGACAATACTTAAGCGGTGCCAAGCAGATTATTGTGCCGACCCAACGCACACCAAGAGATAAGAACAAAACGGTTGAAC
TCATTGGAGCCAGTGGCAACAACCTTAAAGACGTCAATCTTTCAGTGCCTGTTGGGCTATTCAGTTGTATCACCGGGGTT
TCTGGTTCAGGTAAATCAACACTGATTAACGACACCTTCTTCAAAATTGCGCATACTCAACTCAATGGGGCGACCACTGC
TCAACCAGCGCCTTATAAGTCTATTAAAGGCTTAGAGCACTTCGATAAAGTCATCGATATCGACCAGAGCCCGATAGGTC
GCACACCGCGTTCGAATCCAGCGACCTATACGGGGATTTTCACTCCGATTCGAGAGCTGTTCTCCGGCACCCAAGAGTCT
CGTTCACGTGGCTATAAACCTGGGCGTTTCAGCTTTAACGTTCGTGGTGGCCGCTGTGAAGCTTGCCAAGGTGATGGTGT
TATCAAGGTTGAAATGCATTTCCTACCCGATGTGTACGTGCCTTGTGATGTGTGTAAGGGCAAGCGCTACAACCGAGAAA
CGTTAGAAGTTCACTATAAAGGGAAGAGCATTGATGAAGTTCTGGAAATGACGGTGGAAGATGCTCGAGACTTTTTCGAC
CCAGTTCCCGTTATTGCGCGCAAGTTGCAAACCTTAATGGATGTTGGTCTTTCTTATATCCGTTTAGGTCAAGCGGCCAC
CACCCTCTCTGGCGGTGAAGCACAACGGGTGAAACTGGCCCGTGAGTTGTCCAAACGCGATACGGGAAAAACCCTTTATA
TTTTGGATGAACCAACGACGGGCCTACACTTCCACGATATCCAGCAACTTTTGACCGTATTGCATCGCTTGCGCGATCAT
GGCAACACCGTTGTCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCCGACTGGATCATCGACTTAGGTCCAGAAGG
CGGCCAAGGTGGAGGGGAAATCATTGCTCAAGGAACACCTGAAGATGTGGCGCAGATCGAAGGTTCGCATACCGCACGCT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-396)

• UvrA interaction domain (UvrA_inter) (130-236)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.962	100	0.581
uvrA	Streptococcus pneumoniae TIGR4	57.962	100	0.581
uvrA	Streptococcus pneumoniae D39	57.962	100	0.581