Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   SaO82_RS09960 Genome accession   NZ_CP038819
Coordinates   1968844..1969887 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain O82     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1963844..1974887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SaO82_RS09930 (SaO82_1855) - 1964265..1965521 (-) 1257 WP_078071269.1 aminopeptidase -
  SaO82_RS09935 (SaO82_1856) - 1965524..1965724 (-) 201 WP_000180460.1 DUF1128 family protein -
  SaO82_RS09940 (SaO82_1857) - 1965871..1966335 (+) 465 WP_136142647.1 low molecular weight protein-tyrosine-phosphatase -
  SaO82_RS09945 (SaO82_1858) - 1966342..1966617 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  SaO82_RS09950 (SaO82_1859) - 1966895..1968112 (+) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  SaO82_RS09955 (SaO82_1860) vraR 1968225..1968854 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  SaO82_RS09960 (SaO82_1861) vraS 1968844..1969887 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  SaO82_RS09965 (SaO82_1862) liaF 1969884..1970585 (-) 702 WP_000149070.1 cell wall-active antibiotics response protein LiaF -
  SaO82_RS09970 (SaO82_1863) - 1970600..1970986 (-) 387 WP_001110179.1 hypothetical protein -
  SaO82_RS09975 (SaO82_1864) map 1971203..1971961 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  SaO82_RS09980 (SaO82_1865) - 1972488..1973474 (+) 987 WP_000999713.1 aromatic acid exporter family protein -
  SaO82_RS09985 (SaO82_1866) - 1973663..1974076 (-) 414 WP_025174666.1 hypothetical protein -
  SaO82_RS09990 - 1974105..1974215 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=355822 SaO82_RS09960 WP_001017131.1 1968844..1969887(-) (vraS) [Staphylococcus aureus strain O82]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=355822 SaO82_RS09960 WP_001017131.1 1968844..1969887(-) (vraS) [Staphylococcus aureus strain O82]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATTTTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATT
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCGGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment