Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BAMTA208_RS14290 Genome accession   NC_017188
Coordinates   2842271..2842966 (-) Length   231 a.a.
NCBI ID   WP_013353252.1    Uniprot ID   A0A9P1JJD9
Organism   Bacillus amyloliquefaciens TA208     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2837271..2847966
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAMTA208_RS14270 (BAMTA208_14845) - 2837652..2838371 (-) 720 WP_014470840.1 TIGR02206 family membrane protein -
  BAMTA208_RS14275 (BAMTA208_14850) - 2838478..2840418 (-) 1941 WP_014470841.1 ABC transporter permease -
  BAMTA208_RS14280 (BAMTA208_14855) - 2840411..2841170 (-) 760 Protein_2870 ABC transporter ATP-binding protein -
  BAMTA208_RS14285 (BAMTA208_14860) - 2841274..2842278 (-) 1005 WP_014470842.1 sensor histidine kinase -
  BAMTA208_RS14290 (BAMTA208_14865) braR 2842271..2842966 (-) 696 WP_013353252.1 response regulator transcription factor Regulator
  BAMTA208_RS14295 (BAMTA208_14870) - 2843034..2844347 (-) 1314 WP_013353253.1 ABC transporter permease -
  BAMTA208_RS14300 (BAMTA208_14875) - 2844337..2845032 (-) 696 WP_013353254.1 ABC transporter ATP-binding protein -
  BAMTA208_RS14305 (BAMTA208_14880) - 2845048..2846028 (-) 981 WP_014470843.1 hypothetical protein -
  BAMTA208_RS14310 (BAMTA208_14885) - 2846065..2847051 (-) 987 WP_013353256.1 ABC transporter permease -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26831.95 Da        Isoelectric Point: 6.3906

>NTDB_id=35578 BAMTA208_RS14290 WP_013353252.1 2842271..2842966(-) (braR) [Bacillus amyloliquefaciens TA208]
MFHILLIEDDNTLFHEMKERLTGWSFAVHGIKDFSRVTREFTEIKPDLVMIDVQLPKFDGFHWCRMIRSQSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAVFRRVYQYNAEPALIKRWSGAAIDAETNMVSHENGSVELTKNEMLI
LKLLAEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDQLGIGKMIETKVGQGYIAKEEDGLYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=35578 BAMTA208_RS14290 WP_013353252.1 2842271..2842966(-) (braR) [Bacillus amyloliquefaciens TA208]
ATGTTTCATATTTTGTTAATAGAAGATGATAACACTTTGTTTCACGAGATGAAAGAGAGATTAACGGGCTGGTCATTTGC
GGTGCACGGGATAAAGGATTTCAGCCGGGTTACCCGGGAATTTACCGAAATCAAGCCCGATTTGGTGATGATTGATGTGC
AGCTGCCGAAATTTGACGGCTTTCATTGGTGCAGAATGATACGCTCCCAATCAAACGTGCCGATTCTGTTTTTGTCCTCG
CGGGATCATCCCGCAGATATGGTCATGTCGATGCAGCTCGGAGCAGATGATTTCATTCAGAAGCCTTTTCATTTTGACGT
CTTGATTGCTAAAATACAAGCCGTGTTTCGGCGGGTGTATCAATACAATGCAGAACCGGCGCTCATCAAAAGGTGGAGCG
GGGCTGCCATTGATGCTGAAACAAACATGGTGAGCCATGAAAACGGTTCAGTTGAGCTGACCAAAAACGAAATGCTGATT
TTAAAACTGCTGGCCGAGCAGAAAAATAAAATCGTCAGCCGCGAAGAACTCATCAGAAGCTTGTGGAATGATGAGCGTTT
CGTCAGTGATAACACGCTGACGGTGAATGTCAATCGGCTGCGGAAAAAACTTGATCAATTAGGCATCGGGAAGATGATTG
AAACCAAAGTGGGGCAGGGGTACATCGCGAAGGAAGAAGACGGTCTTTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9P1JJD9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.096

94.805

0.39

Multiple sequence alignment