Detailed information NTG0355455

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: E4652_RS06680
• Genome accession: NZ_CP038790
• Coordinates: 1381433..1382536 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain P2013109
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1376433..1387536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E4652_RS06655	-	1378310..1378696 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
E4652_RS06660	-	1378704..1379837 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
E4652_RS06665	-	1379901..1380152 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
E4652_RS06670	coaD	1380207..1380716 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
E4652_RS06675	rsmD	1380737..1381357 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
E4652_RS06680	pilA	1381433..1382536 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
E4652_RS06685	-	1382583..1384181 (-)	1599	Protein_1318	CYTH and CHAD domain-containing protein	-
E4652_RS06690	phnE	1384364..1385185 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
E4652_RS06695	phnE	1385182..1386051 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
E4652_RS06700	-	1386069..1386554 (-)	486	Protein_1321	phosphonate ABC transporter ATP-binding protein	-
E4652_RS06705	-	1386548..1387498 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=355455 E4652_RS06680 WP_023853086.1 1381433..1382536(+) (pilA) [Bordetella pertussis strain P2013109]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=355455 E4652_RS06680 WP_023853086.1 1381433..1382536(+) (pilA) [Bordetella pertussis strain P2013109]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507