Detailed information NTG0355285

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: E5D09_RS01645
• Genome accession: NZ_CP038644
• Coordinates: 351399..352100 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain ACN21
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 346399..357100

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5D09_RS01615 (E5D09_01615)	-	346704..347147 (-)	444	WP_001246675.1	SRPBCC family protein	-
E5D09_RS01620 (E5D09_01620)	tadA	347217..347721 (-)	505	Protein_325	tRNA adenosine(34) deaminase TadA	-
E5D09_RS01625 (E5D09_01625)	-	347728..348852 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
E5D09_RS01630 (E5D09_01630)	ung	348849..349562 (-)	714	WP_029424376.1	uracil-DNA glycosylase	-
E5D09_RS01635 (E5D09_01635)	-	349613..350209 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
E5D09_RS01640 (E5D09_01640)	gspK	350440..351399 (-)	960	WP_029424377.1	type II secretion system minor pseudopilin GspK	-
E5D09_RS01645 (E5D09_01645)	xcpW	351399..352100 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
E5D09_RS01650 (E5D09_01650)	xcpV	352100..352480 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
E5D09_RS01655 (E5D09_01655)	-	352470..353024 (-)	555	WP_005128793.1	type II secretion system protein	-
E5D09_RS01660 (E5D09_01660)	-	353034..353642 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
E5D09_RS01665 (E5D09_01665)	-	353680..354453 (-)	774	WP_000497295.1	TatD family hydrolase	-
E5D09_RS01670 (E5D09_01670)	-	354471..354812 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
E5D09_RS01675 (E5D09_01675)	-	354824..355804 (-)	981	WP_001075409.1	DNA polymerase III subunit delta'	-
E5D09_RS01680 (E5D09_01680)	kdsB	355816..356577 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=355285 E5D09_RS01645 WP_000594589.1 351399..352100(-) (xcpW) [Acinetobacter baumannii strain ACN21]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=355285 E5D09_RS01645 WP_000594589.1 351399..352100(-) (xcpW) [Acinetobacter baumannii strain ACN21]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996