Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | E0W60_RS20215 | Genome accession | NZ_CP038635 |
| Coordinates | 2039220..2040581 (-) | Length | 453 a.a. |
| NCBI ID | WP_135705402.1 | Uniprot ID | A0A4P7LBQ9 |
| Organism | Cupriavidus oxalaticus strain X32 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2034220..2045581
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0W60_RS20200 (E0W60_20200) | - | 2035170..2036135 (-) | 966 | WP_133096352.1 | MurR/RpiR family transcriptional regulator | - |
| E0W60_RS20205 (E0W60_20205) | - | 2036441..2038375 (+) | 1935 | WP_135705401.1 | ATP-binding cassette domain-containing protein | - |
| E0W60_RS20210 (E0W60_20210) | - | 2038546..2039031 (-) | 486 | WP_029045809.1 | disulfide bond formation protein B | - |
| E0W60_RS20215 (E0W60_20215) | radA | 2039220..2040581 (-) | 1362 | WP_135705402.1 | DNA repair protein RadA | Machinery gene |
| E0W60_RS20220 (E0W60_20220) | alr | 2040696..2041817 (-) | 1122 | WP_133096355.1 | alanine racemase | - |
| E0W60_RS20225 (E0W60_20225) | lplT | 2042422..2043741 (+) | 1320 | WP_135705403.1 | lysophospholipid transporter LplT | - |
| E0W60_RS20230 (E0W60_20230) | - | 2043772..2044920 (-) | 1149 | WP_133096357.1 | DUF1853 family protein | - |
Sequence
Protein
Download Length: 453 a.a. Molecular weight: 48344.75 Da Isoelectric Point: 7.2390
>NTDB_id=355237 E0W60_RS20215 WP_135705402.1 2039220..2040581(-) (radA) [Cupriavidus oxalaticus strain X32]
MAKTKTVYTCTECGGTAPRWAGQCPHCQQWNTLVETVAETAASKRFQPLAASAMVRKLSEIEAADVPRFSSGIDEFDRVL
GGGLVAGGVVLIGGDPGIGKSTLLLQALANLAGQRRVLYVSGEESGAQIALRAQRLGVESPALGLLAEIQLEKIQATLET
EKPEVAVIDSIQTLYSEALTSAPGSVAQVRECAAQLTRIAKSSGITIILVGHVTKEGSLAGPRVLEHIVDTVLYFEGDTH
SSHRLIRAFKNRFGAVNELGVFAMTERGLRGISNPSALFLSQHEETVPGSCVLVTQEGTRPLLVEIQALVDTAHVPNPRR
LAVGLEQNRLALLLAVLHRHAGIACFDQDVFLNAVGGVKITEPAADLAVLLSIHSSMRNKPLPRGLVVFGEVGLAGEIRP
SPRGQERLKEAAKLGFTLAVIPKANAPKQKIDGLEVIAVERIEQAIDRVRHLD
MAKTKTVYTCTECGGTAPRWAGQCPHCQQWNTLVETVAETAASKRFQPLAASAMVRKLSEIEAADVPRFSSGIDEFDRVL
GGGLVAGGVVLIGGDPGIGKSTLLLQALANLAGQRRVLYVSGEESGAQIALRAQRLGVESPALGLLAEIQLEKIQATLET
EKPEVAVIDSIQTLYSEALTSAPGSVAQVRECAAQLTRIAKSSGITIILVGHVTKEGSLAGPRVLEHIVDTVLYFEGDTH
SSHRLIRAFKNRFGAVNELGVFAMTERGLRGISNPSALFLSQHEETVPGSCVLVTQEGTRPLLVEIQALVDTAHVPNPRR
LAVGLEQNRLALLLAVLHRHAGIACFDQDVFLNAVGGVKITEPAADLAVLLSIHSSMRNKPLPRGLVVFGEVGLAGEIRP
SPRGQERLKEAAKLGFTLAVIPKANAPKQKIDGLEVIAVERIEQAIDRVRHLD
Nucleotide
Download Length: 1362 bp
>NTDB_id=355237 E0W60_RS20215 WP_135705402.1 2039220..2040581(-) (radA) [Cupriavidus oxalaticus strain X32]
TTGGCCAAGACCAAGACCGTCTACACCTGTACCGAATGCGGCGGCACCGCGCCGCGCTGGGCCGGCCAGTGCCCGCATTG
CCAGCAATGGAACACGCTGGTGGAAACGGTGGCCGAGACGGCCGCGTCCAAGCGCTTCCAGCCGCTGGCGGCATCGGCCA
TGGTGCGCAAGCTGTCCGAGATCGAGGCCGCGGACGTGCCGCGCTTCTCCAGCGGCATCGACGAGTTCGACCGCGTGCTG
GGCGGCGGACTGGTGGCGGGCGGCGTGGTGCTGATCGGCGGCGATCCCGGTATCGGCAAGTCCACGCTGCTGCTGCAGGC
GCTGGCCAACCTGGCCGGGCAGCGCCGCGTGCTCTATGTCAGCGGCGAGGAATCGGGCGCGCAGATCGCCCTGCGCGCGC
AGCGGCTGGGCGTGGAAAGCCCGGCGCTGGGGCTGCTCGCCGAAATCCAGCTAGAGAAGATCCAGGCCACGCTCGAAACC
GAGAAGCCGGAAGTGGCGGTGATCGACTCGATCCAGACGCTGTACTCGGAGGCGCTGACGTCGGCGCCGGGCTCGGTCGC
GCAGGTGCGCGAGTGCGCGGCGCAGCTCACGCGCATCGCCAAGAGCAGCGGCATCACCATCATCCTGGTCGGCCACGTCA
CCAAGGAAGGCAGCCTGGCCGGGCCGCGCGTGCTGGAGCATATCGTCGACACGGTGCTGTACTTCGAGGGCGATACGCAT
TCTTCGCACCGGCTGATCCGCGCCTTCAAGAACCGCTTCGGCGCGGTCAACGAGCTGGGCGTGTTCGCCATGACCGAGCG
CGGGCTGCGTGGCATCAGCAACCCCTCGGCGCTGTTCCTGTCGCAGCATGAAGAGACCGTGCCCGGCTCGTGCGTGCTGG
TGACGCAGGAAGGCACGCGCCCGCTGCTGGTGGAGATCCAGGCGCTGGTCGACACCGCCCACGTGCCCAACCCGCGCCGG
CTGGCGGTGGGCCTGGAGCAGAACCGGCTGGCGCTGCTGCTGGCGGTGCTGCACCGGCATGCGGGCATTGCCTGCTTCGA
CCAGGATGTGTTCCTGAACGCGGTAGGCGGGGTCAAGATCACCGAGCCGGCCGCCGACCTGGCGGTGCTGCTGTCGATCC
ATTCGTCGATGCGCAACAAGCCGCTGCCGCGCGGGCTGGTGGTCTTTGGCGAAGTCGGCCTGGCCGGCGAAATCCGGCCC
AGCCCGCGCGGCCAGGAACGGCTGAAGGAAGCGGCCAAGCTGGGGTTCACGCTGGCCGTGATCCCCAAGGCCAATGCGCC
CAAGCAGAAGATCGACGGCCTGGAAGTGATCGCGGTGGAGCGCATCGAGCAGGCAATCGACCGGGTGCGCCACCTGGACT
GA
TTGGCCAAGACCAAGACCGTCTACACCTGTACCGAATGCGGCGGCACCGCGCCGCGCTGGGCCGGCCAGTGCCCGCATTG
CCAGCAATGGAACACGCTGGTGGAAACGGTGGCCGAGACGGCCGCGTCCAAGCGCTTCCAGCCGCTGGCGGCATCGGCCA
TGGTGCGCAAGCTGTCCGAGATCGAGGCCGCGGACGTGCCGCGCTTCTCCAGCGGCATCGACGAGTTCGACCGCGTGCTG
GGCGGCGGACTGGTGGCGGGCGGCGTGGTGCTGATCGGCGGCGATCCCGGTATCGGCAAGTCCACGCTGCTGCTGCAGGC
GCTGGCCAACCTGGCCGGGCAGCGCCGCGTGCTCTATGTCAGCGGCGAGGAATCGGGCGCGCAGATCGCCCTGCGCGCGC
AGCGGCTGGGCGTGGAAAGCCCGGCGCTGGGGCTGCTCGCCGAAATCCAGCTAGAGAAGATCCAGGCCACGCTCGAAACC
GAGAAGCCGGAAGTGGCGGTGATCGACTCGATCCAGACGCTGTACTCGGAGGCGCTGACGTCGGCGCCGGGCTCGGTCGC
GCAGGTGCGCGAGTGCGCGGCGCAGCTCACGCGCATCGCCAAGAGCAGCGGCATCACCATCATCCTGGTCGGCCACGTCA
CCAAGGAAGGCAGCCTGGCCGGGCCGCGCGTGCTGGAGCATATCGTCGACACGGTGCTGTACTTCGAGGGCGATACGCAT
TCTTCGCACCGGCTGATCCGCGCCTTCAAGAACCGCTTCGGCGCGGTCAACGAGCTGGGCGTGTTCGCCATGACCGAGCG
CGGGCTGCGTGGCATCAGCAACCCCTCGGCGCTGTTCCTGTCGCAGCATGAAGAGACCGTGCCCGGCTCGTGCGTGCTGG
TGACGCAGGAAGGCACGCGCCCGCTGCTGGTGGAGATCCAGGCGCTGGTCGACACCGCCCACGTGCCCAACCCGCGCCGG
CTGGCGGTGGGCCTGGAGCAGAACCGGCTGGCGCTGCTGCTGGCGGTGCTGCACCGGCATGCGGGCATTGCCTGCTTCGA
CCAGGATGTGTTCCTGAACGCGGTAGGCGGGGTCAAGATCACCGAGCCGGCCGCCGACCTGGCGGTGCTGCTGTCGATCC
ATTCGTCGATGCGCAACAAGCCGCTGCCGCGCGGGCTGGTGGTCTTTGGCGAAGTCGGCCTGGCCGGCGAAATCCGGCCC
AGCCCGCGCGGCCAGGAACGGCTGAAGGAAGCGGCCAAGCTGGGGTTCACGCTGGCCGTGATCCCCAAGGCCAATGCGCC
CAAGCAGAAGATCGACGGCCTGGAAGTGATCGCGGTGGAGCGCATCGAGCAGGCAATCGACCGGGTGCGCCACCTGGACT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Bacillus subtilis subsp. subtilis str. 168 |
50.885 |
99.779 |
0.508 |
| radA | Streptococcus mitis SK321 |
46.696 |
100 |
0.468 |
| radA | Streptococcus pneumoniae D39 |
46.593 |
100 |
0.468 |
| radA | Streptococcus pneumoniae TIGR4 |
46.593 |
100 |
0.468 |
| radA | Streptococcus pneumoniae R6 |
46.593 |
100 |
0.468 |
| radA | Streptococcus pneumoniae Rx1 |
46.593 |
100 |
0.468 |
| radA | Streptococcus mitis NCTC 12261 |
46.374 |
100 |
0.466 |