Detailed information NTG0355228

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: E0W60_RS12385
• Genome accession: NZ_CP038635
• Coordinates: 335657..336817 (-)
• Length: 386 a.a.
• NCBI ID: WP_135704347.1
• Uniprot ID: -
• Organism: Cupriavidus oxalaticus strain X32
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 330657..341817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0W60_RS12365 (E0W60_12365)	-	331449..332786 (-)	1338	WP_135704345.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
E0W60_RS12370 (E0W60_12370)	-	333171..333806 (-)	636	WP_133093621.1	ANTAR domain-containing protein	-
E0W60_RS12375 (E0W60_12375)	-	334048..334749 (+)	702	WP_133093622.1	fumarylacetoacetate hydrolase family protein	-
E0W60_RS12380 (E0W60_12380)	maiA	334754..335401 (+)	648	WP_133093623.1	maleylacetoacetate isomerase	-
E0W60_RS12385 (E0W60_12385)	pilA	335657..336817 (-)	1161	WP_135704347.1	signal recognition particle-docking protein FtsY	Machinery gene
E0W60_RS12390 (E0W60_12390)	-	337045..338583 (+)	1539	WP_135704349.1	pitrilysin family protein	-
E0W60_RS12395 (E0W60_12395)	-	338593..339984 (+)	1392	WP_135704350.1	pitrilysin family protein	-
E0W60_RS12400 (E0W60_12400)	rsmD	340073..340777 (+)	705	WP_205751646.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
E0W60_RS12405 (E0W60_12405)	coaD	341017..341502 (+)	486	WP_029046761.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 386 a.a.
• Molecular weight: 41033.56 Da
• Isoelectric Point: 6.7480

>NTDB_id=355228 E0W60_RS12385 WP_135704347.1 335657..336817(-) (pilA) [Cupriavidus oxalaticus strain X32]
MFSFWKKRKAEPASVETPAPAPAPLEAPAPTPTPAPAPTPAPVPTPTPVPAQVPPPAPAPVAVSQAAPEAATIETLELVP
PPATSAEARQGWMQRLRTGLSKTSRNIGTLFVGVKVDEALFEELETALLMADAGVEATEYLLAELRKRVRSERIESAEGV
KAALKTLLTDLLRPLEKTMALGREQPLVMMIAGVNGAGKTTSIGKLCKHFQRFDQKVLLAAGDTFRAAAREQLTIWGERN
NVTVVAQESGDPAAVIFDAVNAAKARGIDIVMADTAGRLPTQLHLMEELKKVKRVISKAMPTAPHEVLLVIDANTGQNAL
QQTRAFDDALGLTGLVVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKAEEFAEALLG

Nucleotide

• Length: 1161 bp

>NTDB_id=355228 E0W60_RS12385 WP_135704347.1 335657..336817(-) (pilA) [Cupriavidus oxalaticus strain X32]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAGCCCGCGTCCGTCGAAACGCCAGCGCCGGCACCCGCGCCGCTGGAGGC
GCCCGCGCCCACCCCCACGCCTGCCCCGGCCCCTACCCCGGCTCCGGTCCCGACGCCGACACCAGTCCCCGCCCAGGTGC
CGCCCCCGGCGCCGGCCCCCGTGGCCGTGTCCCAGGCCGCGCCCGAGGCCGCCACCATCGAAACGCTTGAACTGGTCCCC
CCGCCCGCCACCAGCGCCGAAGCCCGGCAAGGATGGATGCAGCGGCTGCGTACCGGCCTGTCCAAGACCAGCCGCAACAT
CGGCACGCTGTTCGTCGGCGTCAAGGTCGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGACGCGG
GCGTGGAAGCCACCGAATATCTGCTCGCCGAGCTGCGCAAGCGGGTCAGGTCCGAGCGCATCGAATCGGCCGAAGGCGTC
AAGGCCGCGCTCAAGACGCTTCTGACCGACCTGCTGCGCCCGCTGGAAAAGACCATGGCGCTGGGCCGCGAACAGCCGCT
GGTGATGATGATCGCGGGCGTCAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGCGCTTCG
ACCAGAAGGTGCTGCTGGCCGCCGGCGATACCTTCCGCGCCGCCGCGCGCGAACAGCTGACGATCTGGGGCGAGCGCAAC
AACGTCACGGTGGTGGCGCAGGAAAGCGGCGACCCCGCCGCGGTGATCTTCGACGCGGTGAACGCGGCCAAGGCGCGCGG
CATCGACATCGTGATGGCCGATACCGCCGGCCGCCTGCCGACGCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTCAAGC
GCGTCATCAGCAAGGCCATGCCGACCGCGCCGCATGAGGTGCTGCTGGTGATCGACGCCAATACCGGCCAGAACGCGCTG
CAGCAAACCCGCGCCTTCGACGATGCGCTGGGGCTGACCGGCCTGGTCGTGACCAAGCTGGACGGGACAGCCAAGGGCGG
CATCCTGGCGGCGATCGCACGCCAGCGCCCGGTGCCGGTGTACTTCATCGGCGTGGGCGAGAAGGTGGAGGATCTGCAGC
CGTTCAAGGCGGAGGAATTCGCCGAAGCGCTTCTGGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (111-166)

• SRP54-type protein, GTPase domain (SRP54) (187-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.476	100	0.549