Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   SaO268_RS10640 Genome accession   NZ_CP038612
Coordinates   2034478..2035521 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain O268     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2029478..2040521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SaO268_RS10610 (SaO268_1957) - 2029899..2031155 (-) 1257 WP_001793428.1 aminopeptidase -
  SaO268_RS10615 (SaO268_1958) - 2031158..2031358 (-) 201 WP_000180462.1 DUF1128 family protein -
  SaO268_RS10620 (SaO268_1959) - 2031505..2031969 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  SaO268_RS10625 (SaO268_1960) - 2031976..2032251 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  SaO268_RS10630 (SaO268_1961) - 2032529..2033746 (+) 1218 WP_000037094.1 YihY/virulence factor BrkB family protein -
  SaO268_RS10635 (SaO268_1962) vraR 2033859..2034488 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  SaO268_RS10640 (SaO268_1963) vraS 2034478..2035521 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  SaO268_RS10645 (SaO268_1964) liaF 2035518..2036219 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  SaO268_RS10650 (SaO268_1965) - 2036234..2036620 (-) 387 WP_001110180.1 hypothetical protein -
  SaO268_RS10655 (SaO268_1966) map 2036837..2037595 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  SaO268_RS10660 (SaO268_1967) - 2038167..2039153 (+) 987 WP_000999713.1 aromatic acid exporter family protein -
  SaO268_RS10665 (SaO268_1968) - 2039345..2039758 (-) 414 WP_014532664.1 hypothetical protein -
  SaO268_RS10670 - 2039787..2039899 (-) 113 Protein_2003 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=355202 SaO268_RS10640 WP_001017131.1 2034478..2035521(-) (vraS) [Staphylococcus aureus strain O268]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=355202 SaO268_RS10640 WP_001017131.1 2034478..2035521(-) (vraS) [Staphylococcus aureus strain O268]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATTTTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment