Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   EQK04_RS06725 Genome accession   NZ_CP038517
Coordinates   1328288..1328869 (+) Length   193 a.a.
NCBI ID   WP_017367156.1    Uniprot ID   A0AB39J8T9
Organism   Bacillus altitudinis strain SCU11     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1323288..1333869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQK04_RS06700 (EQK04_06775) - 1323954..1325132 (+) 1179 WP_051005660.1 N-acetyldiaminopimelate deacetylase -
  EQK04_RS06705 (EQK04_06780) - 1325183..1325425 (+) 243 WP_003211408.1 YkuS family protein -
  EQK04_RS06710 (EQK04_06785) - 1325448..1326257 (-) 810 WP_017367155.1 mechanosensitive ion channel family protein -
  EQK04_RS06715 (EQK04_06790) ahpA 1326529..1327071 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  EQK04_RS06720 (EQK04_06795) - 1327348..1327806 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  EQK04_RS06725 (EQK04_06800) rok 1328288..1328869 (+) 582 WP_017367156.1 hypothetical protein Regulator
  EQK04_RS06730 (EQK04_06805) - 1328932..1329849 (-) 918 WP_017367157.1 hypothetical protein -
  EQK04_RS06735 (EQK04_06810) - 1329933..1330514 (+) 582 WP_017367158.1 molybdenum cofactor guanylyltransferase -
  EQK04_RS06740 (EQK04_06815) - 1330544..1331560 (+) 1017 WP_017367159.1 ThiF family adenylyltransferase -
  EQK04_RS06745 (EQK04_06820) glp 1331570..1332844 (+) 1275 WP_026050083.1 gephyrin-like molybdotransferase Glp -
  EQK04_RS06750 (EQK04_06825) mobB 1332826..1333353 (+) 528 WP_026050094.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  EQK04_RS06755 (EQK04_06830) - 1333346..1333837 (+) 492 WP_017367162.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21875.86 Da        Isoelectric Point: 9.7309

>NTDB_id=354993 EQK04_RS06725 WP_017367156.1 1328288..1328869(+) (rok) [Bacillus altitudinis strain SCU11]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=354993 EQK04_RS06725 WP_017367156.1 1328288..1328869(+) (rok) [Bacillus altitudinis strain SCU11]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACCAGCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGTTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

80

98.446

0.788

Multiple sequence alignment