Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | E4664_RS18565 | Genome accession | NZ_CP038500 |
| Coordinates | 3796811..3797284 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214068.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain CIAT758 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3791811..3802284
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4664_RS18540 (E4664_18540) | - | 3792275..3794380 (-) | 2106 | WP_135536597.1 | RelA/SpoT family protein | - |
| E4664_RS18545 (E4664_18545) | - | 3794420..3794550 (-) | 131 | Protein_3615 | hypothetical protein | - |
| E4664_RS18550 (E4664_18550) | rpoZ | 3794588..3794866 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| E4664_RS18555 (E4664_18555) | gmk | 3794939..3795568 (-) | 630 | WP_000015936.1 | guanylate kinase | - |
| E4664_RS18560 (E4664_18560) | ispH | 3795691..3796641 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| E4664_RS18565 (E4664_18565) | fimU | 3796811..3797284 (+) | 474 | WP_001214068.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| E4664_RS18570 (E4664_18570) | pilV | 3797278..3797838 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| E4664_RS18575 (E4664_18575) | pilW | 3797839..3798840 (+) | 1002 | WP_000079199.1 | PilW family protein | Machinery gene |
| E4664_RS18580 (E4664_18580) | pilX | 3798837..3799655 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16851.46 Da Isoelectric Point: 8.5355
>NTDB_id=354880 E4664_RS18565 WP_001214068.1 3796811..3797284(+) (fimU) [Acinetobacter baumannii strain CIAT758]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLEANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLEANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=354880 E4664_RS18565 WP_001214068.1 3796811..3797284(+) (fimU) [Acinetobacter baumannii strain CIAT758]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGAGGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAATTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGACGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTTATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGAGGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAATTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGACGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTTATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |