Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SaO217_RS13020 Genome accession   NZ_CP038461
Coordinates   2656600..2657265 (-) Length   221 a.a.
NCBI ID   WP_199878609.1    Uniprot ID   -
Organism   Staphylococcus aureus strain O217     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2651600..2662265
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SaO217_RS13000 - 2652053..2652166 (-) 114 WP_014937089.1 hypothetical protein -
  SaO217_RS13005 (SaO217_2507) - 2652842..2654842 (-) 2001 WP_199878608.1 ABC transporter permease -
  SaO217_RS13010 (SaO217_2508) - 2654839..2655594 (-) 756 WP_000923764.1 ABC transporter ATP-binding protein -
  SaO217_RS13015 (SaO217_2509) braS 2655702..2656589 (-) 888 WP_000143418.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SaO217_RS13020 braR 2656600..2657265 (-) 666 WP_199878609.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SaO217_RS13025 (SaO217_2511) - 2657291..2657491 (-) 201 WP_000604727.1 hypothetical protein -
  SaO217_RS13030 (SaO217_2512) - 2657689..2659113 (+) 1425 WP_000953743.1 alkaline phosphatase -
  SaO217_RS13645 - 2659173..2659274 (-) 102 WP_000731972.1 SE2200 family small protein -
  SaO217_RS13040 (SaO217_2513) - 2659396..2659851 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SaO217_RS13045 (SaO217_2514) - 2660096..2660857 (-) 762 WP_000323448.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25330.43 Da        Isoelectric Point: 4.9212

>NTDB_id=354595 SaO217_RS13020 WP_199878609.1 2656600..2657265(-) (braR) [Staphylococcus aureus strain O217]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILGEAKVVYQEQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=354595 SaO217_RS13020 WP_199878609.1 2656600..2657265(-) (braR) [Staphylococcus aureus strain O217]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGGTGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991

Multiple sequence alignment