Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E4T63_RS26380 Genome accession   NZ_CP038438
Coordinates   5700397..5700801 (-) Length   134 a.a.
NCBI ID   WP_003229093.1    Uniprot ID   -
Organism   Pseudomonas fluorescens strain LBUM677     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5695397..5705801
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E4T63_RS26365 (E4T63_26365) - 5697167..5699221 (-) 2055 WP_027610585.1 methyl-accepting chemotaxis protein -
  E4T63_RS26370 (E4T63_26370) - 5699422..5699961 (-) 540 WP_007964098.1 chemotaxis protein CheW -
  E4T63_RS26375 (E4T63_26375) pilH 5699972..5700337 (-) 366 WP_025109154.1 twitching motility response regulator PilH -
  E4T63_RS26380 (E4T63_26380) pilG 5700397..5700801 (-) 405 WP_003229093.1 twitching motility response regulator PilG Regulator
  E4T63_RS26385 (E4T63_26385) gshB 5701027..5701998 (+) 972 WP_095137531.1 glutathione synthase -
  E4T63_RS26390 (E4T63_26390) - 5702106..5703005 (+) 900 WP_007964106.1 energy transducer TonB -
  E4T63_RS26395 (E4T63_26395) - 5703239..5703811 (+) 573 WP_041063515.1 YqgE/AlgH family protein -
  E4T63_RS26400 (E4T63_26400) ruvX 5703811..5704248 (+) 438 WP_003229101.1 Holliday junction resolvase RuvX -
  E4T63_RS26405 (E4T63_26405) pyrR 5704330..5704836 (+) 507 WP_027610583.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14617.02 Da        Isoelectric Point: 6.7107

>NTDB_id=354297 E4T63_RS26380 WP_003229093.1 5700397..5700801(-) (pilG) [Pseudomonas fluorescens strain LBUM677]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLDAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=354297 E4T63_RS26380 WP_003229093.1 5700397..5700801(-) (pilG) [Pseudomonas fluorescens strain LBUM677]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGATGACTCGAAAACGATTCGTCGCACCGCCGAAACGCTGTT
GAAAAATGTGGGCTGCGAAGTCATCACGGCGATCGATGGCTTCGACGCTTTGGCGAAGATCGCCGACCACCACCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
GCCACGCCGGTGATCATGCTGTCGTCGCGTGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAGCTGCTTGACGCGATTCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694

Multiple sequence alignment