Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GO596_RS08970 Genome accession   NZ_CP046628
Coordinates   1812516..1813001 (-) Length   161 a.a.
NCBI ID   WP_021142040.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1807516..1818001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS08950 (GO596_08950) alsS 1807973..1809646 (-) 1674 WP_157339650.1 acetolactate synthase AlsS -
  GO596_RS08955 (GO596_08955) - 1809901..1810083 (-) 183 WP_021142043.1 hypothetical protein -
  GO596_RS08960 (GO596_08960) - 1810067..1811302 (-) 1236 WP_157339651.1 tetratricopeptide repeat protein -
  GO596_RS08965 (GO596_08965) - 1811292..1812479 (-) 1188 WP_039690955.1 AI-2E family transporter -
  GO596_RS08970 (GO596_08970) mutX 1812516..1813001 (-) 486 WP_021142040.1 NUDIX hydrolase Machinery gene
  GO596_RS08975 (GO596_08975) - 1813153..1813575 (-) 423 WP_157339652.1 HD domain-containing protein -
  GO596_RS08980 (GO596_08980) rfbB 1813715..1814761 (-) 1047 WP_021142038.1 dTDP-glucose 4,6-dehydratase -
  GO596_RS08985 (GO596_08985) - 1814989..1815585 (-) 597 WP_004231151.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  GO596_RS08990 (GO596_08990) rfbA 1815585..1816454 (-) 870 WP_004231150.1 glucose-1-phosphate thymidylyltransferase RfbA -
  GO596_RS08995 (GO596_08995) - 1816588..1817376 (-) 789 WP_157339653.1 Nif3-like dinuclear metal center hexameric protein -

Sequence

Protein


Download         Length: 161 a.a.        Molecular weight: 18880.21 Da        Isoelectric Point: 4.3823

>NTDB_id=354028 GO596_RS08970 WP_021142040.1 1812516..1813001(-) (mutX) [Streptococcus equinus strain CNU 77-23]
MTKLATICYIDNGEALLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECAKREIFEETHFIVKEMDFKGVITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDKVLSKPTWEGDYEIFKWILDDVPFFSAKFTYDDQQRLVDKSVTFYDN
K

Nucleotide


Download         Length: 486 bp        

>NTDB_id=354028 GO596_RS08970 WP_021142040.1 1812516..1813001(-) (mutX) [Streptococcus equinus strain CNU 77-23]
ATGACAAAGTTAGCAACGATTTGTTATATTGATAATGGTGAGGCACTTTTGCTTTTGCACCGTAATAAAAAGCCAAATGA
TGTTCATGAAGGAAAATGGATTTCAGTTGGTGGTAAGCTTGAAGCAGGTGAGACTCCTGATGAATGCGCAAAGCGTGAAA
TTTTTGAAGAAACTCATTTTATCGTTAAAGAAATGGACTTTAAGGGAGTGATTACTTTCCCTGAATTTACACCTGGTCAT
GATTGGTACACTTATGTGTTTAAAGTGACTGATTTTGAGGGTGAGTTGATTTCTGATGAGGAATCACGTGAAGGTACATT
GGAATGGGTTCCTTATGATAAAGTTCTTTCAAAACCGACTTGGGAAGGTGATTACGAAATCTTTAAGTGGATTTTGGATG
ATGTTCCATTCTTTTCAGCTAAATTTACTTATGATGACCAACAACGTTTAGTTGATAAAAGTGTCACTTTCTATGATAAT
AAGTAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.811

98.758

0.689

Multiple sequence alignment