Detailed information    

insolico Bioinformatically predicted

Overview

Name   xerS   Type   Machinery gene
Locus tag   GO596_RS07910 Genome accession   NZ_CP046628
Coordinates   1588198..1589268 (-) Length   356 a.a.
NCBI ID   WP_039690757.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1583198..1594268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS07890 (GO596_07890) - 1583593..1584345 (+) 753 WP_033152622.1 ABC transporter ATP-binding protein -
  GO596_RS07895 (GO596_07895) - 1584347..1586332 (+) 1986 WP_157339541.1 FtsX-like permease family protein -
  GO596_RS07900 (GO596_07900) braR 1586433..1587095 (+) 663 WP_024344090.1 DNA-binding response regulator Regulator
  GO596_RS07905 (GO596_07905) - 1587092..1588033 (+) 942 WP_157339542.1 sensor histidine kinase -
  GO596_RS07910 (GO596_07910) xerS 1588198..1589268 (-) 1071 WP_039690757.1 tyrosine recombinase XerS Machinery gene
  GO596_RS07915 (GO596_07915) - 1589783..1591165 (-) 1383 WP_157339543.1 ABC transporter ATP-binding protein -
  GO596_RS07920 (GO596_07920) - 1591169..1591858 (-) 690 WP_074450494.1 energy-coupling factor transporter transmembrane component T -
  GO596_RS07925 (GO596_07925) - 1591924..1592511 (-) 588 WP_157339544.1 MptD family putative ECF transporter S component -
  GO596_RS07930 (GO596_07930) - 1592522..1594255 (-) 1734 WP_157339545.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 41330.55 Da        Isoelectric Point: 9.7127

>NTDB_id=354022 GO596_RS07910 WP_039690757.1 1588198..1589268(-) (xerS) [Streptococcus equinus strain CNU 77-23]
MKREKLLEKIDELKKIMPWYVLDYYQSKLSVPYSFTTLYEYLKEYRRFFEWILESGISNAEKIADVELTTLEHLSKKDME
SFVLYLRERPSLNTYSTKQGVSQTTINRTLSALSSLFKYLTEEVEDENGDPYFYRNVMKKIATKKKKETLAARAENIKGK
LFLGDETMAFIEYIDKEYQNKLSHRALSSFQKNKERDLAIIALLLASGVRLSEAVNLDLKDLNLNMMVIEVTRKGGKRDS
VNVAAFAKPYLEEYLKIRAPRYKAEKQDQALFLTEYRGVPNRIDASSIEKLVAKYSQDFKVRVTPHKLRHTLATRLYGAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=354022 GO596_RS07910 WP_039690757.1 1588198..1589268(-) (xerS) [Streptococcus equinus strain CNU 77-23]
ATGAAACGTGAAAAATTACTTGAAAAAATTGATGAATTAAAAAAAATAATGCCCTGGTATGTCCTTGACTATTACCAATC
AAAACTTTCTGTGCCATATAGTTTTACAACCTTGTACGAATATCTTAAGGAATACAGACGATTTTTTGAATGGATTCTTG
AATCAGGAATTTCAAATGCTGAAAAAATTGCTGACGTTGAACTAACAACTTTAGAACATTTGTCTAAAAAAGATATGGAA
TCCTTCGTTCTCTATTTGCGTGAACGACCTTCGCTAAATACCTATTCAACTAAGCAAGGGGTCTCTCAGACCACTATCAA
TCGCACGTTATCAGCGCTTTCAAGCCTTTTTAAATATCTAACAGAAGAGGTTGAGGATGAAAATGGTGACCCCTACTTCT
ATCGAAATGTCATGAAAAAGATTGCAACTAAGAAGAAGAAAGAAACTTTAGCTGCTCGTGCTGAAAACATCAAAGGAAAG
CTATTCTTGGGAGATGAGACGATGGCGTTTATCGAGTATATTGACAAAGAATATCAGAATAAGCTCTCTCACCGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGTGATTTAGCTATTATTGCACTTCTTCTTGCTTCTGGTGTCCGTCTTTCTGAAG
CAGTTAATCTTGATTTAAAAGATTTAAACCTCAATATGATGGTTATTGAAGTCACTCGTAAAGGTGGAAAACGAGACTCT
GTTAACGTTGCTGCTTTTGCTAAACCATACCTCGAAGAATACTTAAAAATTCGTGCACCTCGTTATAAAGCAGAAAAACA
AGATCAAGCACTATTTTTAACAGAATACCGTGGTGTTCCAAATCGTATTGATGCATCAAGTATTGAAAAATTAGTAGCTA
AATACTCACAAGACTTTAAAGTTCGAGTGACACCCCACAAGCTACGTCACACTTTGGCAACAAGATTGTATGGAGCTACT
AAATCACAAGTACTCGTCAGCCACCAATTAGGGCATGCAAGTACACAAGTTACTGACTTATATACCCATATTGTCAATGA
TGAACAGAAAAATGCTTTGGACAAATTATAA

Domains

Predicted by InterProScan.

Phage integrase family (Phage_integrase)

(188-344)

Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_1)

(59-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

83.708

100

0.837