Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GO005_RS15515 Genome accession   NZ_CP046592
Coordinates   3006613..3007308 (-) Length   231 a.a.
NCBI ID   WP_004399109.1    Uniprot ID   O34951
Organism   Bacillus subtilis strain TR21     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3001613..3012308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO005_RS15495 (GO005_15485) yttA 3002040..3002786 (+) 747 WP_003229141.1 LMBR1 domain-containing protein -
  GO005_RS15500 (GO005_15490) bceB 3002823..3004763 (-) 1941 WP_032722367.1 bacitracin ABC transporter permease BceB -
  GO005_RS15505 (GO005_15495) bceA 3004753..3005514 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  GO005_RS15510 (GO005_15500) bceS 3005616..3006620 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  GO005_RS15515 (GO005_15505) braR 3006613..3007308 (-) 696 WP_004399109.1 two-component response regulator BceR Regulator
  GO005_RS15520 (GO005_15510) ytrF 3007405..3008715 (-) 1311 WP_004398682.1 ABC transporter permease YtrF -
  GO005_RS15525 (GO005_15515) ytrE 3008705..3009400 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  GO005_RS15530 (GO005_15520) ytrD 3009415..3010392 (-) 978 WP_032722368.1 ABC transporter permease YtrD -
  GO005_RS15535 (GO005_15525) ytrC 3010422..3011408 (-) 987 WP_015714563.1 ABC transporter permease YtrC -
  GO005_RS15540 (GO005_15530) ytrB 3011402..3012280 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26866.74 Da        Isoelectric Point: 5.3731

>NTDB_id=353793 GO005_RS15515 WP_004399109.1 3006613..3007308(-) (braR) [Bacillus subtilis strain TR21]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=353793 GO005_RS15515 WP_004399109.1 3006613..3007308(-) (braR) [Bacillus subtilis strain TR21]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34951

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377