Detailed information NTG0353741

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GO005_RS08815
• Genome accession: NZ_CP046592
• Coordinates: 1689103..1690092 (+)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain TR21
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1684103..1695092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO005_RS08800 (GO005_08790)	acpP	1684300..1684533 (+)	234	WP_003154310.1	acyl carrier protein	-
GO005_RS08805 (GO005_08795)	rncS	1684673..1685422 (+)	750	WP_003232030.1	ribonuclease III	-
GO005_RS08810 (GO005_08800)	smc	1685523..1689083 (+)	3561	WP_032721538.1	chromosome segregation protein SMC	-
GO005_RS08815 (GO005_08805)	pilA	1689103..1690092 (+)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
GO005_RS08820 (GO005_08810)	sivC	1690129..1690614 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
GO005_RS08825 (GO005_08815)	srpM	1690791..1691123 (+)	333	WP_003238590.1	putative DNA-binding protein	-
GO005_RS08830 (GO005_08820)	ffh	1691137..1692477 (+)	1341	WP_014113771.1	signal recognition particle protein	-
GO005_RS08835 (GO005_08825)	rpsP	1692583..1692855 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
GO005_RS08840 (GO005_08830)	khpA	1692855..1693100 (+)	246	WP_014476792.1	KH domain-containing protein	-
GO005_RS08845 (GO005_08835)	ylqD	1693222..1693608 (+)	387	WP_032721548.1	YlqD family protein	-
GO005_RS08850 (GO005_08840)	rimM	1693613..1694137 (+)	525	WP_024572420.1	ribosome maturation factor RimM	-
GO005_RS08855 (GO005_08845)	trmD	1694134..1694865 (+)	732	WP_003232011.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=353741 GO005_RS08815 WP_003232026.1 1689103..1690092(+) (pilA) [Bacillus subtilis strain TR21]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=353741 GO005_RS08815 WP_003232026.1 1689103..1690092(+) (pilA) [Bacillus subtilis strain TR21]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGTGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTCAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCCGGAAGCGATCC
GGCAGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGTCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAGTTCTCTAAAGCAACAAATGT
TACCGGCATTGCCTTAACGAAGCTTGACGGTACGGCAAAGGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGATCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401